Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06896 ATGGCAGCTGAGTTAGTCAATGCTGCAACAAGCGAGAAATTGGCTGAAACTGATTGGGCAAAAAATATTGAAATATGTGAGTTGGTTGCACGTGATAAAAGGCAAGCTAGAGATGTTGTTAAAGCTATCAAGAAGAGACTCGGTAGCAAACACCCCGACGCCCAACTTTATGCTGTCACGTTGCTGGAGATGTTGATGAACAATACTGGAGAGCATATTCATGAGCAGGTGATTGATATCGGAATTATTCCTATTCTTGTGAAAATTGTGAAGAAAAAGTCTGATTTGCCTGTGAGGGAGAGGATATTTCTTCTACTAGATGCCACACACTCATCCCTTGGCGGTGCTTCTGGAAAATTTCCTCAGTATTATAATGCATATTATGATTTGGTGAATGCTGGAGTGCAGTTTCCTCAAAGTGCTCAAGCGGTCCAATCAAACCACGCTAGTTCACAACCTAGTAGGGCCGGTAGTGTACCAAACAGGGAGCAGGCCTCACCTAGACAAGAAGTGCCTGTACCACAAGCAGAGACAGTTCCTGAATCTAGCATCATTCAAAAGGCTGGTAATGCATTGGAAGTTTTAAAAGAAGTCCTTGATGCTGTTGATGCTCAACATCCTCAGGGAGCAAGCGAAGAGTTTACCCTTGACCTTGTAGAACAATGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGGATAGTTTCTCTAGCAATTGAATTGAATGAACAGCTTCAGAAAGTTCTTGCAAGACATGACGACCTTGTTTCTGGAAGAGCTACAAAACCTGCTAATGAACATGTTCCAAAAGTTCAACAAAGACGCGATGGCGTTGTATCTAGCAGAGCGACAACAACTGCTAATGAACAGTTTCCGAAAGTTCTACCAAGACGAGATGACATTGTAACTAGCAGAACCACAACAACTGCTAATGAACAGTTTCCAAAAGTTCCTCCAAGACGCAATGATGTTGTATCTGGCAGGGCTACAACAACAACTGTTATTACCCGCTTTGACCACGATGAATCAGAGGAGGAAGAGGAGCCTGAACAGTTAGTGCGAAGATTACGCAAAGGAAAGGCTTGTGCAAGGCCTGAAGACGAAGAAACTGAAACAGACCTCTCTCGCATGCGTTTGAATGGGGAGAGACTCAATCGTCCTTTAATACGGCCACTGTCCTCAGAGCCATCTCGAGAAGCTCACAGTCCTGTTCCTCCACCGGCTGTGATTCCACCTCCGCGTCCAAAACAGAATGGGGAGCTTCCTCCTGTTGCAATTCCACCGCCGCCTGCAAAACACATGGAGAGGGAAAAGTTTTTTCAGGAAAACAAGGATGCTTCTAATCTGTCTGGTCACAGGAGAGGCCTCTCTTTACATAGTCGCAATGGCAGCAGCTCTCACAGTCACAATGGAAGTTTTGATTTTAGCGACTGA 1455 0.4467 MAAELVNAATSEKLAETDWAKNIEICELVARDKRQARDVVKAIKKRLGSKHPDAQLYAVTLLEMLMNNTGEHIHEQVIDIGIIPILVKIVKKKSDLPVRERIFLLLDATHSSLGGASGKFPQYYNAYYDLVNAGVQFPQSAQAVQSNHASSQPSRAGSVPNREQASPRQEVPVPQAETVPESSIIQKAGNALEVLKEVLDAVDAQHPQGASEEFTLDLVEQCSFQKQRVMHLVMASRDERIVSLAIELNEQLQKVLARHDDLVSGRATKPANEHVPKVQQRRDGVVSSRATTTANEQFPKVLPRRDDIVTSRTTTTANEQFPKVPPRRNDVVSGRATTTTVITRFDHDESEEEEEPEQLVRRLRKGKACARPEDEETETDLSRMRLNGERLNRPLIRPLSSEPSREAHSPVPPPAVIPPPRPKQNGELPPVAIPPPPAKHMEREKFFQENKDASNLSGHRRGLSLHSRNGSSSHSHNGSFDFSD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06896 484 MobiDBLite consensus disorder prediction 460 484 - -
Mepo3g06896 484 MobiDBLite consensus disorder prediction 267 291 - -
Mepo3g06896 484 Pfam VHS domain 5 109 IPR002014 GO:0035091|GO:0043130
Mepo3g06896 484 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
Mepo3g06896 484 Gene3D - 180 272 IPR038425 -
Mepo3g06896 484 MobiDBLite consensus disorder prediction 438 456 - -
Mepo3g06896 484 Pfam GAT domain 192 265 IPR004152 GO:0035091|GO:0043130
Mepo3g06896 484 ProSiteProfiles GAT domain profile. 176 264 IPR004152 GO:0035091|GO:0043130
Mepo3g06896 484 CDD GAT_GGA-like_plant 184 262 - -
Mepo3g06896 484 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Mepo3g06896 484 Gene3D - 2 136 IPR008942 -
Mepo3g06896 484 MobiDBLite consensus disorder prediction 356 387 - -
Mepo3g06896 484 CDD VHS 2 130 - -
Mepo3g06896 484 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Mepo3g06896 484 MobiDBLite consensus disorder prediction 407 437 - -
Mepo3g06896 484 SUPERFAMILY GAT-like domain 181 266 - -
Mepo3g06896 484 MobiDBLite consensus disorder prediction 345 484 - -
Mepo3g06896 484 MobiDBLite consensus disorder prediction 142 165 - -
Mepo3g06896 484 MobiDBLite consensus disorder prediction 142 182 - -
Mepo3g06896 484 PANTHER TOM1-LIKE PROTEIN 1 455 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06896 Mepo-Chr3 82663875 82670217 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06896 - - mtr:25489880 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06896 3 82663875 82670217 Mepo3g06896 3 82663875 82670217 ECH
Mepo2g04491 2 53379420 53385429 Mepo3g06896 3 82663875 82670217 PCT