Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04491 ATGGCAGCCGAGCTAGTCAATGCTGCAACAAGTGAGAAACTGTCTGAAATTGATTGGATGAAAAATATTGAAATCTCTGAATTAGTTGCTCGTGATCATAGAAAAGCTAAAGATGTTGTCAAAGCTATAAAAAAAAGACTTGGTAACAAGAACCCCAATACTCAACTTTATGCTGTCATGTTGCTGGAAATGTTGATGAACAACATAGGAGATCATATTCATGAGCAGGTGGTTCATGCAGAAGTTATTCCTATTCTTGTGAAAATTGTAAAGAAAAAGTCAGATTTGCCTGTCAGGGAGCGAATATTTCTCCTACTAGATGCAACACAAACATCTCTTGGTGGTGCTTCGGGAAAGTTTCCACAGTATTATAAGGCATATTATGACTTAGTGAGTGCCGGGGTACAATTTCCTCAAAGAGCTCAAGTTGTCCAGTCAAATCGTCTTAGTTCACAACCAAATAAGACTAATAATGTACCAAAAAGGGAGCCCTCCCTACTTAGACGTGAAGAGGTTGCTCAGAAAGCAGAACCCAACACTGTTCCTGAATCTAGCATTATCCAAAAGGCCAGTAATGTATTGGAAGTTCTAAAAGAAGTCCTTGATGCCGTTGATGGCAAACATCCTCAGGGAGCAAGAGATGAATTCACCCTTGACCTTGTTGAGCAATGTTCATTTCAAAAGCAGAGGGTAATGCATCTTGTGATGGCTTCTAGAGATGAGAGGATAGTTTCCCGAGCAATTGAAGTGAATGAGCAACTTCAGAAAGTTCTAGAGAGACATGATGACCTTCTTTCTAGCAAAGTTACAACAACTGTGAATCAATTTGATCATGAAGAAGCAGAGGAGCAAGAGGAACCTGAACAGTTATTCAGAAGATTACGCAAAGGAAAAGCTTGTGTAAGGCCTGAAGATGAAGAAACTAAACCTCAGTTCCCTCAGTTGAGTTTGCTTGAAGAGAGACTCAACCGTCCACTAATAAGACCACTCTCCTTGGAACCATCTCAAGAAGCTAATAATTGTCCTGTACCTGTTGTAGTTCCTCCTCCAAGTACAAAACACAATGGGGAGCTTCCTCCTGTTGCAATTCCGCCGCCACCTTCGAAGCACGTCGAGAGAGAAAAATATTTTCAGCATAATAAGGACAGTGGCACTTTGGCTAGCCACATCAGAGGCCTCTCTTTACATAGTCGCAATGGCAGTAGTTCACAGAGTGGAAGCTTTGATTTTAGTGATTGA 1239 0.4108 MAAELVNAATSEKLSEIDWMKNIEISELVARDHRKAKDVVKAIKKRLGNKNPNTQLYAVMLLEMLMNNIGDHIHEQVVHAEVIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYKAYYDLVSAGVQFPQRAQVVQSNRLSSQPNKTNNVPKREPSLLRREEVAQKAEPNTVPESSIIQKASNVLEVLKEVLDAVDGKHPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIEVNEQLQKVLERHDDLLSSKVTTTVNQFDHEEAEEQEEPEQLFRRLRKGKACVRPEDEETKPQFPQLSLLEERLNRPLIRPLSLEPSQEANNCPVPVVVPPPSTKHNGELPPVAIPPPPSKHVEREKYFQHNKDSGTLASHIRGLSLHSRNGSSSQSGSFDFSD 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04491 412 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Mepo2g04491 412 MobiDBLite consensus disorder prediction 351 367 - -
Mepo2g04491 412 PANTHER TOM1-LIKE PROTEIN 1 339 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mepo2g04491 412 SUPERFAMILY GAT-like domain 184 267 - -
Mepo2g04491 412 Gene3D - 182 274 IPR038425 -
Mepo2g04491 412 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Mepo2g04491 412 MobiDBLite consensus disorder prediction 145 161 - -
Mepo2g04491 412 MobiDBLite consensus disorder prediction 145 166 - -
Mepo2g04491 412 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Mepo2g04491 412 Pfam GAT domain 193 266 IPR004152 GO:0035091|GO:0043130
Mepo2g04491 412 Gene3D - 2 136 IPR008942 -
Mepo2g04491 412 CDD VHS 2 130 - -
Mepo2g04491 412 CDD GAT_GGA-like_plant 186 264 - -
Mepo2g04491 412 Pfam VHS domain 5 113 IPR002014 GO:0035091|GO:0043130
Mepo2g04491 412 MobiDBLite consensus disorder prediction 381 412 - -
Mepo2g04491 412 SUPERFAMILY ENTH/VHS domain 4 140 IPR008942 -
Mepo2g04491 412 MobiDBLite consensus disorder prediction 351 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04491 Mepo-Chr2 53379420 53385429 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04491 - - pvu:PHAVU_009G157500g 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04491 2 53379420 53385429 Mepo2g04491 2 53379420 53385429 ECH
Mepo2g04491 2 53379420 53385429 Mepo3g06896 3 82663875 82670217 PCT