Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06541 ATGGCTTGTTTGGTACTTCATCCACCAATGCATGAAAATGGCGAGTTTACCAGTAGTTTTAGTCCTCATACGAGGGACTCAATTTTGATTTACCTAACTGTTGGTGGATCTGTGATTCCCATGCATATTTTGGAGACGGATTCCATTGCTTTGGTGAAGCTGAGAATTCAAAACCTTAAAGGATTTTTTGTAAAGAAACCGAAACTGGTTTTTGAAGGGAAGGAATTGGCTCATAACAAATCTTGTGTCAGTGATTATGGTGTTGCTGATGGAAATGTGTTGCACTTAGTGCTAAGGCTTTCTGATCTTAAAGCTATTACTGTTAGGACTTTAAGTGGAAAGGAGTTTGGGTTTTATGTTGAGAAGACTAGGAATGTGGGTTATGTGAAGCAGCAGATTGCAAAGAAAGGGCGAGGGGTCTTCGATCTTGCAGATCAAGAATTAGTATGGGAGGGTAAGGCACTTGAAGATCAGAGACTTATTGAGGACATCTGTAAGGACAACGACTCTGTGATTCATTTGTTGGTCAGGATATCAGATACCAAGGTAAGAACTAAACCGGTTGAGAAGGATTTGGAGTTATCAATTGAGGCATTGTTTGCACACGATACAGTGTCAAATTTAGCTGTGGACCAGTTAGGGCCAGTGTCTATAACAAATAAGGTCCTGAAGAGGAACCAATTGACTAGAGAATTTCTTTTGGAACCAATTTTTAATAATTCCAATATCAAAATTCCACTAGTGGTCCAGGAACTAATTAAGGTTACATTAGAGGGGTTAGAGAAAGGCCGTAAACCAATTCGATCTTCAGAGGGATCAGGGGGAGCTTATCTCATGCAAGATTCATCTGGCTCAAAATATGTTTCAATTTTCAAGCCTACTGATGAGGAGCCAATGGCATTTAATAATCCCCGAGGATTACCTATCTCTGTAGACGGTGAAGGGTTAAAGAAAGGCACACAAGTAGGGCAAGGTGCATTGAGAGAAGTTGCAGCTTACATTTTAGATCATCCGAGGAAAGGACCTCGTTCATATCATAACAATGAGGAGAAGGGGTTTGCTGGAGTTCCGCCAACTGTTATGGTCAGATGCATGCATGAAGGGTTCCACCATCCTGAAGGTTATAAGAATGTTTCAAGTAATGTAAAAATAGGATCACTTCAGATGTTTATGAGGAACATTGGAAGCTGTGAAGACATGGGCCCTAGAGCATTTCCGGTGGAAGAGGTACACAAGATCTCTGTGCTGGATATGAGGTTGGTAAATGCAGATAGACACGCTGGGAACATTTTGGTTGCCAAGAATGGTGAAGATGGTCCAGTTGTCCTTATTCCAATTGATCATGGTTATTGCCTGCCCAAGAGCTTTGAAGACTGCACTTTTGATTGGTTATACTGGCCACAAGCTCAAGAGCCTTACTCCCTAGACACCACTGAGTACATAAAATCTCTGGATGCAGAAGAAGATATTAAGCTTTTGAAGTCTCATGGATGGGAACTTCCGCCGGAATGTGCCCGGATTCTTTGTATATCAACCATGCTTCTTCAGAAAGGTGCAGAGAAAGGACTCACTCCTTTCACCATTGGAAGCATCATGTGTAGAGAAACATTGAAGAAAAAGTCTGTCATTGAGCAGATTATTCACAAAGCGGAGGATGCTGCACTTCCTGGAACAAGTGAAGCTGAATTCCTTGATCTTGTTTCAGTGCTCATGGATAATCATTTAGAAGGGATATTCCCATGA 1743 0.4148 MACLVLHPPMHENGEFTSSFSPHTRDSILIYLTVGGSVIPMHILETDSIALVKLRIQNLKGFFVKKPKLVFEGKELAHNKSCVSDYGVADGNVLHLVLRLSDLKAITVRTLSGKEFGFYVEKTRNVGYVKQQIAKKGRGVFDLADQELVWEGKALEDQRLIEDICKDNDSVIHLLVRISDTKVRTKPVEKDLELSIEALFAHDTVSNLAVDQLGPVSITNKVLKRNQLTREFLLEPIFNNSNIKIPLVVQELIKVTLEGLEKGRKPIRSSEGSGGAYLMQDSSGSKYVSIFKPTDEEPMAFNNPRGLPISVDGEGLKKGTQVGQGALREVAAYILDHPRKGPRSYHNNEEKGFAGVPPTVMVRCMHEGFHHPEGYKNVSSNVKIGSLQMFMRNIGSCEDMGPRAFPVEEVHKISVLDMRLVNADRHAGNILVAKNGEDGPVVLIPIDHGYCLPKSFEDCTFDWLYWPQAQEPYSLDTTEYIKSLDAEEDIKLLKSHGWELPPECARILCISTMLLQKGAEKGLTPFTIGSIMCRETLKKKSVIEQIIHKAEDAALPGTSEAEFLDLVSVLMDNHLEGIFP 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06541 580 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 263 562 IPR000403 -
Mepo3g06541 580 SMART ubq_7 28 99 IPR000626 GO:0005515
Mepo3g06541 580 SMART ubq_7 104 177 IPR000626 GO:0005515
Mepo3g06541 580 Pfam Ubiquitin family 106 177 IPR000626 GO:0005515
Mepo3g06541 580 Pfam Ubiquitin family 34 100 IPR000626 GO:0005515
Mepo3g06541 580 ProSiteProfiles Ubiquitin domain profile. 26 99 IPR000626 GO:0005515
Mepo3g06541 580 SUPERFAMILY Ubiquitin-like 32 101 IPR029071 -
Mepo3g06541 580 Pfam Phosphatidylinositol 3- and 4-kinase 272 528 IPR000403 -
Mepo3g06541 580 SUPERFAMILY Ubiquitin-like 101 178 IPR029071 -
Mepo3g06541 580 Gene3D - 105 193 - -
Mepo3g06541 580 Gene3D - 17 102 - -
Mepo3g06541 580 ProSiteProfiles Ubiquitin domain profile. 104 181 IPR000626 GO:0005515
Mepo3g06541 580 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 37 553 IPR044571 -
Mepo3g06541 580 SUPERFAMILY Protein kinase-like (PK-like) 414 579 IPR011009 -
Mepo3g06541 580 CDD Ubl_ubiquitin_like 106 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06541 Mepo-Chr3 79385897 79389748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06541 1 576 Acyl Lipid Metabolism Gene Families AT5G24240 60.276 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06541 - - gmx:100812724 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03915 1 45473009 45476197 Mepo3g06541 3 79385897 79389748 ECH
Mepo3g06541 3 79385897 79389748 Mepo3g06541 3 79385897 79389748 ECH