Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06283 ATGCATCTTGAGCTAGAAACTTGGACAGCTTTGGTAGCAATTTTGTGTTTACTTTGTTTTATTCTGAAGGAGATTGTTATGGGAGGGAATAGTTCAAAAGGGTCTCCTAGGAGAAGGCATGTTCCTTCATATGAGGCTTCAGGTTCTTCATCTTCATGGAATAATAACTATGATGGATATGGATATCCACCACAATCACCACATCCTCAGCAGAATCCATATCAAACACCTCAGCATCAGTTTTCATCTGCATCAGCTCCATTTTATGAGAATTCACAGCCAAAAAAGAAGTTAGATAAGAGGTATTCAAGGATTGCTGATAATTACCAATCATTGGATGAGGTTACTGCTGCTCTTGCAAATGCTGGACTGGAATCTTCTAATCTCATTGTTGGAATTGATTTCACAAAGAGCAATGAGTGGACAGGGAAGAGTTCATTCAATCGAAAAAGTTTACATCACATTGGAAGTGGTCAAAACCCTTACGAACAAGCAATCTCTATTATTGGGAAAACTCTATCCACTTTTGATGAAGATAACTTGATTCCATGTTTTGGATTTGGAGATGCATCCACACATGATCAAGATGTATTTAGCTTCTATTCAGAAGAGAGGTTATGCAATGGTTTTGAGGAAGTATTGGCACGATACAGAGAAATTGTTCCTCAACTCAAACTTGCAGGACCAACTTCGTTCGCCCCTATTATTGAGATGGCCATGACTATTGTTGAACAAAGTGCTGGTCAATATCATGTCTTGCTAATAATTGCTGATGGACAGGTGACCAGAAGCATTGATACAGAATATGGCAACCTAAGTCCACAGGAACAGAAGACAATAAATGCGATCGTAAAAGCCAGTGAGTATCCATTGTCAATAGTTTTGGTAGGAGTTGGAGATGGGCCGTGGGAGATGATGAAGGAATTTGATGATAACATCCCTTCTCGGGCGTTTGACAATTTTCAGTTTGTTAATTTTACGAAGATAATGTCGAAGAATGTAAATCCAAGTCGAAGAGAGACAGAGTTTGCCCTTGATGCTTTGATGGAGATACCTTCTCAATATAAGGCGACCATAGAACTTGGCTTATTGGGTGCACGGAGGGGACATTCACCGGATAGGGTGCCTCTACCTGCTCCTCTTTATAATAGGACTTCTTCAAGCATCAGTGGAAATTCTTTTCGGTCAAACAGTTTTCAGCAGAGTGTCCCTAGAGATACCGGCTATGAATATGAACGCAGTGTTCACACAGAGCCATCAACAAGCTCTTTACATGATAATAAGGTTTGCCCTATTTGTCTTACTGATGCGAAGGATATGGCCTTCGGTTGTGGACATCAGACTTGTTGTGGATGTGGAGAAGACCTCCAGTTCTGTCCCATTTGCCGGAGCACAATCACTACTAAGATAAAGCTTTACTAG 1422 0.4065 MHLELETWTALVAILCLLCFILKEIVMGGNSSKGSPRRRHVPSYEASGSSSSWNNNYDGYGYPPQSPHPQQNPYQTPQHQFSSASAPFYENSQPKKKLDKRYSRIADNYQSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKSSFNRKSLHHIGSGQNPYEQAISIIGKTLSTFDEDNLIPCFGFGDASTHDQDVFSFYSEERLCNGFEEVLARYREIVPQLKLAGPTSFAPIIEMAMTIVEQSAGQYHVLLIIADGQVTRSIDTEYGNLSPQEQKTINAIVKASEYPLSIVLVGVGDGPWEMMKEFDDNIPSRAFDNFQFVNFTKIMSKNVNPSRRETEFALDALMEIPSQYKATIELGLLGARRGHSPDRVPLPAPLYNRTSSSISGNSFRSNSFQQSVPRDTGYEYERSVHTEPSTSSLHDNKVCPICLTDAKDMAFGCGHQTCCGCGEDLQFCPICRSTITTKIKLY 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06283 473 SUPERFAMILY RING/U-box 423 469 - -
Mepo3g06283 473 ProSiteProfiles Zinc finger RING-type profile. 430 463 IPR001841 -
Mepo3g06283 473 Pfam Zinc finger, C3HC4 type (RING finger) 427 467 - -
Mepo3g06283 473 CDD vWA_copine_like 105 355 IPR010734 -
Mepo3g06283 473 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 407 473 IPR013083 -
Mepo3g06283 473 PANTHER COPINE FAMILY PROTEIN 1 74 450 - -
Mepo3g06283 473 SMART VWA_4 126 326 IPR002035 -
Mepo3g06283 473 MobiDBLite consensus disorder prediction 44 61 - -
Mepo3g06283 473 Pfam Copine 151 364 IPR010734 -
Mepo3g06283 473 MobiDBLite consensus disorder prediction 30 81 - -
Mepo3g06283 473 SUPERFAMILY vWA-like 127 310 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06283 Mepo-Chr3 76958196 76962224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06283 K16280 - gmx:100798816 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04186 2 50700537 50704225 Mepo3g06283 3 76958196 76962224 PCT