Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04186 ATGCATCTAGAGCTGGATACTTTTACAGCTTTGGTTTTGGTTTTGTGTTTCCTTGGATTGATTCTGAAGGAGACAGTAATGGGAGGTAAGAGTTCAAAAGGGTCTCAGAGGAGAGATGTAAATTCATCATCACCATCAACATCATATGGTTCTGTTGGTTCTTCATCTTCATGGGAAAATAACTATGGATATCCACAATCAACATATCCATACCCTCCACAGCAAAATCCATATCAAAGGCCTAATCACCGTCGCCCTACACAAGCTCCCTCTCATGATTATTCACGGCCAGATAGGAAGTTAGACAGGAGATATTCAAGGATTGCTGATGATTATCATTCTCTCGACGAGGTTACTACTGCTCTTTCACATGCTGGCTTGGAATCATCTAATCTCATTGTTGGCATTGATTTCACAAAGAGTAATGAATGGACAGGGAAGAGGTCATTCAATCGAAAAAGTTTACATCACATTGGAAATGGTCAAAATCCGTATGAACAAGCAATTGCAATTATTGGGAAAACATTAACTGCGTTTGATGAGGATAATTTGATTCCTTGTTTTGGATTTGGAGATGCATCAACACATGATCAAGACGTCTTTAGTTTCCATTCAGATGAGAGGTGCTGCAATGGATTTGAAGAAGTTTTGTCAAAATATAGAGAGATTGTTCCGTGCCTCCGACTCGCAGGGCCAACCTCATTTGCTCCTATTATTGAGATGGCCATGACTATTGTTGAGAAAAGCGGCGGCCAATATCATGTCTTGCTTATAATTGCTGATGGACAGGTGACAAGAAGTGTTGACACAGAGAATGGCAAGCTAAGTTCACAGGAAAAGAAGACAATTGATGCAATAGTGAAAGCCAGCGAGTATCCGCTGTCGATAGTTTTGGTTGGAGTTGGAGATGGACCATGGGATATGATGAGGGAATTTGACGATAACATTCCGGCTCGAGCCTTCGACAATTTTCAGTTTGTGAATTTTACGGAAATAATGTCAAGGAATGTGGATTCAAACCGAAAAGAGACAGAGTTTGCTCTAGCAGCTTTGATGGAGATACCTTCTCAATATAAAGCAACCATAGACCACAGCATATTGGGGACACGAAGGGGATATTCACCAGACAGGGTTCCTTTACCTCCACCTCAATATGATAGGGCTTCTTCTAGTAACGCGACAATATCTTTTCGTTCAAATAGTTTTCAGCAAAGTACACATACATATGCTAGCAATGAAAATGAAATGAGCACGGAACCGTCTTCAGGTGGTTTATATGACAATAAGGTTTGCCCAATTTGTCTTGCTAATGCAAAGGATATGGCATTTGGTTGCGGGCATCAGACTTGTTGTGAATGTGGAGAAAGCCTTGAGTTCTGCCCTATTTGCCGGAGCACAATCGATACCCGAATAAAACTTTATTAA 1425 0.4084 MHLELDTFTALVLVLCFLGLILKETVMGGKSSKGSQRRDVNSSSPSTSYGSVGSSSSWENNYGYPQSTYPYPPQQNPYQRPNHRRPTQAPSHDYSRPDRKLDRRYSRIADDYHSLDEVTTALSHAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHHIGNGQNPYEQAIAIIGKTLTAFDEDNLIPCFGFGDASTHDQDVFSFHSDERCCNGFEEVLSKYREIVPCLRLAGPTSFAPIIEMAMTIVEKSGGQYHVLLIIADGQVTRSVDTENGKLSSQEKKTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSRNVDSNRKETEFALAALMEIPSQYKATIDHSILGTRRGYSPDRVPLPPPQYDRASSSNATISFRSNSFQQSTHTYASNENEMSTEPSSGGLYDNKVCPICLANAKDMAFGCGHQTCCECGESLEFCPICRSTIDTRIKLY 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04186 474 SUPERFAMILY RING/U-box 425 470 - -
Mepo2g04186 474 PANTHER COPINE FAMILY PROTEIN 1 62 451 - -
Mepo2g04186 474 SUPERFAMILY vWA-like 130 313 IPR036465 -
Mepo2g04186 474 MobiDBLite consensus disorder prediction 28 100 - -
Mepo2g04186 474 Pfam Copine 154 367 IPR010734 -
Mepo2g04186 474 MobiDBLite consensus disorder prediction 29 69 - -
Mepo2g04186 474 ProSiteProfiles Zinc finger RING-type profile. 431 464 IPR001841 -
Mepo2g04186 474 Pfam Zinc finger, C3HC4 type (RING finger) 428 469 - -
Mepo2g04186 474 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 405 474 IPR013083 -
Mepo2g04186 474 SMART VWA_4 129 332 IPR002035 -
Mepo2g04186 474 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04186 Mepo-Chr2 50700537 50704225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04186 K16280 - gmx:100800161 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04186 2 50700537 50704225 Mepo2g04186 2 50700537 50704225 ECH
Mepo2g04186 2 50700537 50704225 Mepo3g06283 3 76958196 76962224 PCT