Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06226 ATGTGTTTCACCAATTTAGTCAATCAAGATAAAACAACTCATACGCGAAGCAAAAGCAATCACTGTCTAACCATTGATGCTCTGGATAAAGATGATAGCCCTATCCTACCTGGACTTCCTGATGATGTTGCAAAGTATTGCCTTGCACTTGTTCCCCGTTCCAACTTCCCAGCTATGGGTGGTGTCAGCAAGAAATGGAGGTTGTTTATTCGGAGCAAAGAATTTGTGATGGTGCGAAAATTGGCAGGGTTGCTTGAGGAATGGCTCTATTGCTTAACCTTGGACAGTGAAGGGAGGGAAAGCCATTGGGAGGTCATGGATAGCCTCGGTCGCAGATTTCTATCCCTTCCACCAATGCCTGGTCCAGCAAAGGCTTCGTTCGGGGTTGTGGTTCTTAACGGAAAGCTTCTTATCATGGCTGGCTATTCAGCTACTGAAGGAACCGCCGTTGCCTCAGATGAGGTTTACCAATATGATTCTTACCTTAACAGTTGGAGCAGATTATCAAACATGAATGTTGCTCGTTATGACTTCGCTTGTGCCGAAGTGAATGGCTTGGTTTATATTGTTGGAGGCTATGGGGTGAATGGCGACAATCTCTCTAGTGTTGAGATGTACGATCCAGATACTGACAAGTGGACACTGATAGAGAGCCTTCGTCGCCCAAGGTGGGGTTGCTTTGCTTGTGGATTTGAGGATAAGCTCTATGTCATGGGTGGAAGGTCAAGCTTCACTATTGGAAACTCCAAGTTTGTTGATATATATAACCCCGAGAAGCACAGCTGGTGCGAGATTAAGAATGGCTGTGTTATGGTCACAGCTCATGCAGTATTGGAAAAGAAGTTGTTTTGTATTGAGTGGAAAAATCAGCGGAAGCTGGCAATATTCAGTCCTGAAAACAACTCATGGACAATGGTACCTGTCCCATTGACAGGGAGCTCAAGTGTTGGTTTTCGATTCGGGATACTGGACGGAAAGCTGTTGCTATTTCCGGCTGAGAAAGAACCTACTAATCAAACATTGTTATATGATCCAAACGCAGCTTCGGGGTCAGAGTGGCAAACTTCAGACATAAGGCCATCTGGTTTATGCTTGTGCAGTGTAACAATGAGGGCATGA 1119 0.4513 MCFTNLVNQDKTTHTRSKSNHCLTIDALDKDDSPILPGLPDDVAKYCLALVPRSNFPAMGGVSKKWRLFIRSKEFVMVRKLAGLLEEWLYCLTLDSEGRESHWEVMDSLGRRFLSLPPMPGPAKASFGVVVLNGKLLIMAGYSATEGTAVASDEVYQYDSYLNSWSRLSNMNVARYDFACAEVNGLVYIVGGYGVNGDNLSSVEMYDPDTDKWTLIESLRRPRWGCFACGFEDKLYVMGGRSSFTIGNSKFVDIYNPEKHSWCEIKNGCVMVTAHAVLEKKLFCIEWKNQRKLAIFSPENNSWTMVPVPLTGSSSVGFRFGILDGKLLLFPAEKEPTNQTLLYDPNAASGSEWQTSDIRPSGLCLCSVTMRA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06226 372 SMART kelc_smart 234 282 IPR006652 GO:0005515
Mepo3g06226 372 SMART kelc_smart 186 233 IPR006652 GO:0005515
Mepo3g06226 372 SMART kelc_smart 135 185 IPR006652 GO:0005515
Mepo3g06226 372 SUPERFAMILY Kelch motif 86 348 IPR015915 GO:0005515
Mepo3g06226 372 CDD F-box_AtAFR-like 35 79 - -
Mepo3g06226 372 PANTHER OS02G0202900 PROTEIN 2 368 IPR045887 -
Mepo3g06226 372 Pfam Kelch motif 223 266 IPR011498 GO:0005515
Mepo3g06226 372 Gene3D - 75 370 IPR015915 GO:0005515
Mepo3g06226 372 Pfam Kelch motif 125 172 IPR006652 GO:0005515
Mepo3g06226 372 Pfam Kelch motif 174 219 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06226 Mepo-Chr3 76428109 76431162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06226 39 217 Miscellaneous Gene Families AT4G33900 27.979 4.99e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06226 - - gmx:100802912 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06226 3 76428109 76431162 Mepo2g03858 2 47802699 47805338 PCT