Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03847 ATGTCGGGTGGTGTATCGGATGTTCGTGTTGAAGATATTCACTTTTATGATTCATATACTGCAATCAGAATAAAGACTTCACCTGGAAGAGGTGGTTATGTTAGAAACATCTATGTTACTAACATGACTTTGGCTAATGTTGATATTGCTATTCGGTTCACCGGCTCATATGGTGATCATCCAGATGATGCTTATGACCCAAATGCTTTACCAGTAATCGAAAAGATTACAATCGAGGATGTGATAGGTGAAAATATAAAAAAAGCAGGTCTTATAGAAGGTATAGAAGGTGACAATTTCGTCAACATATGCTTATCAAACATCACCCTCAATGTGAGCTCAAACTATCCATGGAACTGCTCTAACATTAGAGGATACTCTGACATGGTTTTTCCGGAAGCTTGTGAGCCGCTCAAGGAGAGGATATTCCCGGACCATTGTTCAGACTGTTACCATTTGTCGAATCACCGACAAAGTTCAAATAATCAAAACAGAGGTGCTTGGTTCATGTCTTGGACAAAAATTTCACTTGACATAAGAAGTTGA 546 0.3864 MSGGVSDVRVEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYDPNALPVIEKITIEDVIGENIKKAGLIEGIEGDNFVNICLSNITLNVSSNYPWNCSNIRGYSDMVFPEACEPLKERIFPDHCSDCYHLSNHRQSSNNQNRGAWFMSWTKISLDIRS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03847 181 PANTHER PECTIN LYASE-RELATED 1 146 - -
Mepo3g03847 181 SUPERFAMILY Pectin lyase-like 2 139 IPR011050 -
Mepo3g03847 181 Pfam Glycosyl hydrolases family 28 5 124 IPR000743 GO:0004650|GO:0005975
Mepo3g03847 181 Gene3D - 1 135 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03847 Mepo-Chr3 47947589 47948832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03847 1 172 Glycoside Hydrolase AT3G62110 58.192 1.16e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03847 - - adu:107492321 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03847 3 47947589 47948832 Mepo4g03558 4 45000650 45004091 PCT