Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02139 ATGGCGAGGGAAGAAGTGTTCGAGTTTCTCGGTTGTGTTCCTCTGCTTCAGAGGCTTCCTCGATCATCTTTACGGAACATTTCTCAACTTGTTATTCTCAAAAACTATGAGCCTGGAGAGTATGTTGTTCGTGAGGGAGAGCCTGGAGAAGGTCTTTATTTCATTTGGGAAGGAGAGGCTGAGGTTATTGGATCTGGTCTTGCTGATGATGAAAAGGATCTAGAGTTTCAATTGAAAAGATATGACTATTTTGGTTTTGGTTTATCAAATGCAGTTCACCATGCTGATGTCGTAGCTCTGACTAAGCTATCCTGTCTAGTGCTTCCCCTTGAGCACTCGGCACTGTTGCAACCAAAGTCTATCTGGAGTGCCGAAAAATCTATTGACACATGCTCACCTGTAGAGCATATATTGCATTTGGAACCAATAGAGGTAGATATTTTTCAAGGAATAACCCCTCCAGATGCTCCAAGATTTGGGAAGGTGTTCGGAGGACAGTTAGTTGGACAGGCATTGGCTGCGGCATCAAAGTCTGTTGATTGTCAAAAAGTTGTCCATAGCTTGCATGTGTATTTCCTTCTCGCAGGGGATTTTAACATACCAATTCTATATAAAGTTAAGCGTCTGCGTGATGGGAAGAGTTTTGCTACGAGGAAAGTGGATGCAATTCAAAAGGGAAACGTCATATTCACTTTGCTCGCTTCATTTCAGAAAGAAGAATTAGGGTTTCAACACCAGGAAGTATCTATGCCATCTGTTCCTACCCCAGATGAGCTTGTATCAATGGAAGAGTTACGAGAGCAACGTCTTACTGACCCTCGTCTTCCAAGAACTTACCGGGCCAAAGTTGCTGCAGCTGAGTTCATTCCCTGGCCCATAGAGATACGCTTCTGTGAACCTAGACCTGCAACAAATCAGACCAAGTCTCCTCCTAGTTTGAGATACTGGTTTAGAGCAAAGGGAAAATTGTCAGATGATCCGGCCTTGCATAGGTGTGTGGCAGCATTTGCTTCTGATCTAATATTTCTTCAAATAAGTGTGAATCCCCATCGTCGGGTGGGCTTAAAGACGCGTGCAGTGAGTTTGGACCACTCCATGTGGTTTCACAGACCTTATAGAGCTGATGACTGGATACTATTTGTGATCTTTAGTCCTACCGCCTTTAATGCACGTGGCTATGTTACAGGCCGAATGTTCAATCAGAAGGGAGAGCTTCTTGTTTCATTGGTTCAAGAAGGCCTCGCGAGGAAGGAGATTCCCAAAAGATCAGCCACCAACTCTAAGCTGTGA 1290 0.4426 MAREEVFEFLGCVPLLQRLPRSSLRNISQLVILKNYEPGEYVVREGEPGEGLYFIWEGEAEVIGSGLADDEKDLEFQLKRYDYFGFGLSNAVHHADVVALTKLSCLVLPLEHSALLQPKSIWSAEKSIDTCSPVEHILHLEPIEVDIFQGITPPDAPRFGKVFGGQLVGQALAAASKSVDCQKVVHSLHVYFLLAGDFNIPILYKVKRLRDGKSFATRKVDAIQKGNVIFTLLASFQKEELGFQHQEVSMPSVPTPDELVSMEELREQRLTDPRLPRTYRAKVAAAEFIPWPIEIRFCEPRPATNQTKSPPSLRYWFRAKGKLSDDPALHRCVAAFASDLIFLQISVNPHRRVGLKTRAVSLDHSMWFHRPYRADDWILFVIFSPTAFNARGYVTGRMFNQKGELLVSLVQEGLARKEIPKRSATNSKL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02139 429 Gene3D - 129 418 IPR042171 -
Mepo3g02139 429 FunFam Acyl-CoA thioesterase II 129 419 - -
Mepo3g02139 429 FunFam Acyl-CoA thioesterase II 1 124 - -
Mepo3g02139 429 PANTHER ACYL-COA THIOESTERASE 119 417 IPR003703 GO:0006637|GO:0047617
Mepo3g02139 429 CDD Thioesterase_II_repeat1 313 414 - -
Mepo3g02139 429 CDD CAP_ED 15 112 IPR000595 -
Mepo3g02139 429 Gene3D Jelly Rolls 1 123 IPR014710 -
Mepo3g02139 429 Pfam Cyclic nucleotide-binding domain 34 111 IPR000595 -
Mepo3g02139 429 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Mepo3g02139 429 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Mepo3g02139 429 SUPERFAMILY cAMP-binding domain-like 3 112 IPR018490 -
Mepo3g02139 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 248 416 IPR029069 -
Mepo3g02139 429 Pfam Thioesterase-like superfamily 160 414 - -
Mepo3g02139 429 CDD Thioesterase_II_repeat2 146 238 - -
Mepo3g02139 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 240 IPR029069 -
Mepo3g02139 429 SMART cnmp_10 15 132 IPR000595 -
Mepo3g02139 429 NCBIfam acyl-CoA thioesterase II 138 416 IPR003703 GO:0006637|GO:0047617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02139 Mepo-Chr3 30868763 30875069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02139 1 429 Acyl Lipid Metabolism Gene Families AT1G01710 65.268 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02139 K01068 - gmx:100813197 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02139 3 30868763 30875069 Mepo3g02139 3 30868763 30875069 ECH
Mepo3g02139 3 30868763 30875069 Mepo1g03750 1 43682223 43689889 PCT