Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03750 ATGGAGCACAAAGAAGAAGTTTTGGAGTTTCTTGGAAGCGTTCCGTTACTACAGAGGCTACCTAGTTCGTCTATAAGGAAGATATCAGAGCTTGTGATTGTTAAACACTATGAGCGAGGGGATTATGTTGCTCGTGAGGGTGAACCAGGAGATGGCACTTACTTCATATGGGATGGAGAGGCCGAGGTTGTTGGATCTGTTAGTGACAGTGATGAAAGTCGCCCTGAGTTCCAATTGAATAAATATGACTACTTTGGTTGTGGTTTGTCAAATACAGTTCATCTCACAGATGTTGTTGCTTTGTCTAAGCTAACATGCTTAGTGCTGCCTCGGAAGCACTTGGCACTGCTATGGCCAAAGTTTATATGGACCGCAGAAAAATGTCCTGAGAGACCCTCATCTGTGGAGAATGTATTGCAATTAGAACCATTAGAGGTAGATACCTTCCAAGGAATCACTCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGACAGCTGGTTGGACAGGCACTAGCTGCAGCATCAAAATCTGTTGACAGTCTTAAGTTACTTCATAGTTTGCATTCCTATTTTCTTCGCATAGGAGACTTAAATTTGCCTATTATATATCAAGTTCATCGTATGAGCGACGGAAGGAGTTTTGCTACACGGAAAGTGGATGCAATGCAAAACGGGAAAGTCATATTCACTTTGCTGGCTTCATTTCATAGACAAGAATCAGGGTTTGACCACCAGGAAGTAGATATGCCATTAGTCCCTGCACCAGAAATGCTTCTTCCATTAGAAGAGTTACGGGAGAGACGTCTAACTGACCCTCGCTTGCCAATAACTTACCGGAACAAAGTGGCTACATCTGAGTACATTCCCTGGCCCATAGAGATACGGTTCTGTGAACCTAAAATTGCAACAAATCAGACAAAATCTCCTCCTAGTTTGAGATACTGGTTTCGAGCAAAGGACAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTGGTGGCATATGCTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCACATCGTGGGAAAGGTTTCACTGCACGTGGTGTTAGTCTGGATCATGCAATGTGGTTTCACCGACCCTTAAAAGCTGATGAGTGGGTGCTATTTGCGATCTTCACTCCTAGTGCTTATGAAGCACGTGGTTTTGTCATAGGTCAAATGTTCAATCAGAAGGGAGAGCTTCTTGCAACATTGATTCAAGAAGGTCTAACCAGGAATGCTAATCTCCAAATCAAACCTATCAAATCTAAGTTGTGA 1293 0.4285 MEHKEEVLEFLGSVPLLQRLPSSSIRKISELVIVKHYERGDYVAREGEPGDGTYFIWDGEAEVVGSVSDSDESRPEFQLNKYDYFGCGLSNTVHLTDVVALSKLTCLVLPRKHLALLWPKFIWTAEKCPERPSSVENVLQLEPLEVDTFQGITLPDAPRFGKVFGGQLVGQALAAASKSVDSLKLLHSLHSYFLRIGDLNLPIIYQVHRMSDGRSFATRKVDAMQNGKVIFTLLASFHRQESGFDHQEVDMPLVPAPEMLLPLEELRERRLTDPRLPITYRNKVATSEYIPWPIEIRFCEPKIATNQTKSPPSLRYWFRAKDKLSDDQALHRCVVAYASDLIFLQVSLNPHRGKGFTARGVSLDHAMWFHRPLKADEWVLFAIFTPSAYEARGFVIGQMFNQKGELLATLIQEGLTRNANLQIKPIKSKL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03750 430 CDD CAP_ED 16 114 IPR000595 -
Mepo1g03750 430 CDD Thioesterase_II_repeat2 147 239 - -
Mepo1g03750 430 SMART cnmp_10 16 140 IPR000595 -
Mepo1g03750 430 Pfam Thioesterase-like superfamily 162 415 - -
Mepo1g03750 430 Gene3D Jelly Rolls 1 126 IPR014710 -
Mepo1g03750 430 CDD Thioesterase_II_repeat1 314 415 - -
Mepo1g03750 430 Pfam Cyclic nucleotide-binding domain 35 115 IPR000595 -
Mepo1g03750 430 Gene3D - 130 420 IPR042171 -
Mepo1g03750 430 PANTHER ACYL-COA THIOESTERASE 121 419 IPR003703 GO:0006637|GO:0047617
Mepo1g03750 430 FunFam Acyl-CoA thioesterase II 2 125 - -
Mepo1g03750 430 ProSiteProfiles cAMP/cGMP binding motif profile. 16 86 IPR000595 -
Mepo1g03750 430 SUPERFAMILY cAMP-binding domain-like 5 120 IPR018490 -
Mepo1g03750 430 FunFam Acyl-CoA thioesterase II 130 420 - -
Mepo1g03750 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 418 IPR029069 -
Mepo1g03750 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 243 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03750 Mepo-Chr1 43682223 43689889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03750 3 419 Acyl Lipid Metabolism Gene Families AT1G01710 64.508 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03750 K01068 - gmx:100803260 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03750 1 43682223 43689889 Mepo1g03750 1 43682223 43689889 ECH
Mepo3g02139 3 30868763 30875069 Mepo1g03750 1 43682223 43689889 PCT