Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02107 ATGGGAACAGAAGCCATAAGGTATGCTGTTGTGACAGGAGCAAATAAGGGAATTGGTTATGGAATATGTAAGAAATTGGCTTCAAGTGGTGTTATGGTTGTGTTAACAGCTAGAAATGAAGAGAGGGGCTTGGAAGCTGTAGAAAGACTCAAAAATGAGCTTGATCTCTCAGACTTTGTGGTTTTTCATCAGCTTGATGTTGATGACCCTGCTAGTGTTGCATCTTTAGCTTCTTTCATTAAAACTATGTTTGGGAAACTTGATATCTTGGTGAATAATGCAGGTGTTCCTGGGGGAATATTATTAGATGGTGAGGCACTACTTAGAAAGAGAAATGGAGCAGAAATTGATACCAAGGAAATAGGGTATGAAACCTATGAGTTAGCTGAAAAATGTTTGAAAACAAATTTCTATGGAGTAGAAAGAGTAACTGAAGCTCTTGTTCCTCTTCTCCAACTATCCACTTCTCCAACAATTGTCAATGTTTCCTCCAGAGCAGGACTACTCAAAAATATATCAAATGAGTGGGCTAGAAAACTGTTTAATGACATTGACAACCTAACAAATGAAAAAATAGATGAGGTGCTAAAAGAGTTTGAGAAAGATTACAAAGAAGGATCACTAGAGATTAAAGGTTGGCCAACTTTTGCTTCTGCTTATACAATGTCAAAAGCAGCTTTAAATGCTTACACAAGGATAATGGCCAAGAAATATCCTCATTTCCACATAAACTCTGTGTGTCCTGGCTTTGTCAAGACTAATATCAATAACAATATTGGAAACTTAAGCATAGATGAAGGTGTTGAAACTCCTTTAATGTTGGCACTATTGTCAAATAATGGTCCTTCAGGTTGTTTCTTTACTAAGGGTGAAGTAATACCCTTTTGA 888 0.3671 MGTEAIRYAVVTGANKGIGYGICKKLASSGVMVVLTARNEERGLEAVERLKNELDLSDFVVFHQLDVDDPASVASLASFIKTMFGKLDILVNNAGVPGGILLDGEALLRKRNGAEIDTKEIGYETYELAEKCLKTNFYGVERVTEALVPLLQLSTSPTIVNVSSRAGLLKNISNEWARKLFNDIDNLTNEKIDEVLKEFEKDYKEGSLEIKGWPTFASAYTMSKAALNAYTRIMAKKYPHFHINSVCPGFVKTNINNNIGNLSIDEGVETPLMLALLSNNGPSGCFFTKGEVIPF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02107 295 FunFam (+)-neomenthol dehydrogenase 2 295 - -
Mepo3g02107 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 220 239 IPR002347 -
Mepo3g02107 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 IPR002347 -
Mepo3g02107 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 IPR002347 -
Mepo3g02107 295 CDD carb_red_PTCR-like_SDR_c 7 295 IPR045313 GO:0016616
Mepo3g02107 295 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 292 - -
Mepo3g02107 295 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 278 IPR036291 -
Mepo3g02107 295 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 207 235 IPR020904 GO:0016491
Mepo3g02107 295 PRINTS Glucose/ribitol dehydrogenase family signature 220 239 IPR002347 -
Mepo3g02107 295 PRINTS Glucose/ribitol dehydrogenase family signature 151 167 IPR002347 -
Mepo3g02107 295 PRINTS Glucose/ribitol dehydrogenase family signature 85 96 IPR002347 -
Mepo3g02107 295 PRINTS Glucose/ribitol dehydrogenase family signature 239 256 IPR002347 -
Mepo3g02107 295 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Mepo3g02107 295 Pfam short chain dehydrogenase 8 171 IPR002347 -
Mepo3g02107 295 Gene3D - 5 295 - -
Mepo3g02107 295 Pfam Enoyl-(Acyl carrier protein) reductase 211 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02107 Mepo-Chr3 30520640 30522528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02107 9 259 Miscellaneous Gene Families AT2G29150 27.451 1.33e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02107 K15095 - gmx:100789626 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02107 3 30520640 30522528 Mepo3g02107 3 30520640 30522528 ECH
Mepo1g03697 1 43110122 43112630 Mepo3g02107 3 30520640 30522528 PCT