Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03697 ATGGCGGAAGCATCAAAAAGGTATGCACTAGTAACAGGAGCTAATAAGGGAATTGGTTATGGGATATGCAAGAAATTGGCTTCAAGTGGTGTTATGGTGGTGCTTACAGCTAGAAATGAGAAAAGAGGTTTAGATGCTGTAGAAAGTTTGAAAGAGTTAGGCCTTTCTGATTTTGTGGTTTTTCATCAACTTGATGTCACTGACCCTATAAGTGTTTCTTCTTTAGTTGAATTCATCAAAATCCAATTTGGGAAGCTTGATATCTTGGTGAACAATGCTGGTGTTGCTGGAGGAATAGTGAATGGAGAAAATGTTGTTAAAAAGGTAAGGGGTGAAATATCTGACTGGAATTTAGCACTGCGTCAAACTTATGAATTAGCCGAAGAATGTGTTGAAATAAACTTCTTTGGTGCTGAAAGAGTAACTGAAGCTCTTCTTCCCCTGCTCCAACTATCTACTTCACCCAGGATTGTCAATGTCTCCTCTAGACGTGGACAATTCAAGTTTATGCCAAATGAATGGGCAAGAGGAGTGTTTGATGACATCAAAAACGTTACAAACGAAAAACTTGGTGAAGTGCTTAGAGTGTTTTTGAAAGATTACAAAGAAGGAGCATTGGAAACCAAAAATTGGCCAACATTTGTTTCTGGTTACACAATGGCAAAAGCAGCTTTAAATTCTTACACAAGGTTGCTAGCTTTGAAGCTCCCTCGTTTCCGCATAAATTGTTTATGCCCTGACTTTGTTAAGACTGATATTAACGAGATGAAAGGCCTTTTAAGCATTGATGAAGGTGCTGAATGTCCTGTGAAGCTAGCATTGTTGCCAGATGATGGCCCTTCTGGTCTATTTTTTTTACATGACGAAGTTATTTCATATTAA 882 0.3832 MAEASKRYALVTGANKGIGYGICKKLASSGVMVVLTARNEKRGLDAVESLKELGLSDFVVFHQLDVTDPISVSSLVEFIKIQFGKLDILVNNAGVAGGIVNGENVVKKVRGEISDWNLALRQTYELAEECVEINFFGAERVTEALLPLLQLSTSPRIVNVSSRRGQFKFMPNEWARGVFDDIKNVTNEKLGEVLRVFLKDYKEGALETKNWPTFVSGYTMAKAALNSYTRLLALKLPRFRINCLCPDFVKTDINEMKGLLSIDEGAECPVKLALLPDDGPSGLFFLHDEVISY 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03697 293 PRINTS Glucose/ribitol dehydrogenase family signature 237 254 IPR002347 -
Mepo1g03697 293 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Mepo1g03697 293 PRINTS Glucose/ribitol dehydrogenase family signature 218 237 IPR002347 -
Mepo1g03697 293 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Mepo1g03697 293 PRINTS Glucose/ribitol dehydrogenase family signature 149 165 IPR002347 -
Mepo1g03697 293 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 205 233 IPR020904 GO:0016491
Mepo1g03697 293 CDD carb_red_PTCR-like_SDR_c 7 293 IPR045313 GO:0016616
Mepo1g03697 293 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 290 - -
Mepo1g03697 293 FunFam (+)-neomenthol dehydrogenase 2 293 - -
Mepo1g03697 293 Pfam short chain dehydrogenase 8 168 IPR002347 -
Mepo1g03697 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 218 237 IPR002347 -
Mepo1g03697 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Mepo1g03697 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 IPR002347 -
Mepo1g03697 293 Gene3D - 2 293 - -
Mepo1g03697 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 279 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03697 Mepo-Chr1 43110122 43112630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03697 2 288 Acyl Lipid Metabolism Gene Families AT1G63380 22.222 1.09e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03697 K15095 - gmx:100802560 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03697 1 43110122 43112630 Mepo1g03697 1 43110122 43112630 ECH
Mepo1g03697 1 43110122 43112630 Mepo3g02107 3 30520640 30522528 PCT