Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02061 ATGGGTTTGTTCTTTGGGATATTTCTGGGAGTATTATTCGGCGTAGCATTGATGGCTGGATGGGAGAGAATGATGAGATACAGAAGCCGCAAGAGAATTGCAAAGGCAGTTGATATTAAACTCCTTGGATCCCTTAATAGAGACGACTTAAAGAAAATTTGTGGTGAAAATTTACCTGAATGGATATCTTTCCCTGTATATGAGCAGGTGAAATGGCTAAACAAGCAGCTGTCCAAGTTGTGGCCATTTGTGGCAGATGCAGCAACTATGGTGATAAGAGAATCTGTTGAACCACTATTAGAAGAGTATAGACCTCCTGGAATTTCTTCGTTGAAGTTAAGTAAGCTGTCCCTTGGAACTGTCGCTCCAAAAATTGAAGGCATTCGTGTTCAGAGTCTTCAAAAAGGTCAAATCATAATGGACATTGATTTTCGTTGGGGTGGTGATCCTAATATTGTTTTGGGTGTTGAAGCACTTGTTGCGTCAATTCCTATTCAGTTGAAGGATCTCCAGGTTTTCACCATTATCCGTGTTATATTCCAACTCGCCGAAGAGATCCCCTGCATTTCTGCTGTTGTTGTTGCCCTACTTGCTGAGCCAAAGCCTAGAATTGATTACACTCTGAAGGCAGTTGGTGGAAGTTTGACGGCACTTCCTGGACTTTCAGATATGATTGATGATACTGTGAACTCAATTGTTACCGATATGCTCCAATGGCCTCATCGGATTGTTGTTCCACTTGGTGGTACTCCTGTGGATACTAGTGATCTGGAGCTTAAACCCCAGGGAATACTTAAAGTGACTGTAATGAAAGCAAATGATCTAAAGAATATGGAAATGATTGGGAAGTCTGATCCTTACGTAGTTGTGCATATTCGACCACTGTTTAAAGTCAAAACAAAGGTTGTTGATAACAACTTGAATCCAATTTGGAATGAGGAATTCGACTTGATTGCAGAAGACAAGGAGACCCAGTCACTCACTCTCGAGGTTTTTGATAAAGACATTGGGCAAGATAAACGGTTGGGAGTAGCAAAATTGCCACTTATTAACCTGGAAGCAGAAACTGAAAAGGAAATTGAACTGAGGCTTCTGTCATCACTTGATACATTGAAAGTAAAAGATAAGAAGGATCGAGGAACCTTGAGAATAAAGTATTTCTATCATGAATTTAACAAGGAAGAACAGATGGCTGCACTAGAAGCAGAGAAAATGACACTAGAACAAAGGAAGAAACTGAAAGAGGAAGGAGTTATTGGAAGTACAATGGACGCGCTAGACGGAGCAGCATCAGTAGTTGGTTCTGGTGCTGGACTTGTAGGAAGTGGAATCGGGGCTGGAGCTGGAATGGTGGGAAGTGGGATTGGTGCTGGAGCTGGAATGGTGGGAAGTGGATTCAGTGCTGGAGCTGGAATTGTTGGCAGTGGGCTTGGTGCCGTTGGCAGTAGACTGAGCAGGGCAGGAAAGTTCATGGGCAGGACAATCACAGGGCAATCTGCATCGAGAAGGAGTGCCAGCGGTCCATCTACTCCTGTCTTTAATGTGGAGGAAAGTGGGGCTGGCGCAAAGCCACGGTAA 1578 0.4341 MGLFFGIFLGVLFGVALMAGWERMMRYRSRKRIAKAVDIKLLGSLNRDDLKKICGENLPEWISFPVYEQVKWLNKQLSKLWPFVADAATMVIRESVEPLLEEYRPPGISSLKLSKLSLGTVAPKIEGIRVQSLQKGQIIMDIDFRWGGDPNIVLGVEALVASIPIQLKDLQVFTIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGLSDMIDDTVNSIVTDMLQWPHRIVVPLGGTPVDTSDLELKPQGILKVTVMKANDLKNMEMIGKSDPYVVVHIRPLFKVKTKVVDNNLNPIWNEEFDLIAEDKETQSLTLEVFDKDIGQDKRLGVAKLPLINLEAETEKEIELRLLSSLDTLKVKDKKDRGTLRIKYFYHEFNKEEQMAALEAEKMTLEQRKKLKEEGVIGSTMDALDGAASVVGSGAGLVGSGIGAGAGMVGSGIGAGAGMVGSGFSAGAGIVGSGLGAVGSRLSRAGKFMGRTITGQSASRRSASGPSTPVFNVEESGAGAKPR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02061 525 Coils Coil 390 417 - -
Mepo3g02061 525 PRINTS C2 domain signature 305 318 IPR000008 -
Mepo3g02061 525 PRINTS C2 domain signature 280 292 IPR000008 -
Mepo3g02061 525 PRINTS C2 domain signature 327 335 IPR000008 -
Mepo3g02061 525 FunFam synaptotagmin-4 isoform X1 258 416 - -
Mepo3g02061 525 CDD C2 265 359 - -
Mepo3g02061 525 SMART C2_3c 264 361 IPR000008 -
Mepo3g02061 525 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 415 IPR045050 GO:0008289
Mepo3g02061 525 MobiDBLite consensus disorder prediction 494 513 - -
Mepo3g02061 525 CDD SMP_SYT 59 247 - -
Mepo3g02061 525 Pfam C2 domain 263 359 IPR000008 -
Mepo3g02061 525 MobiDBLite consensus disorder prediction 494 525 - -
Mepo3g02061 525 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 248 IPR031468 GO:0008289
Mepo3g02061 525 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 263 392 IPR035892 -
Mepo3g02061 525 Gene3D C2 domain 258 417 IPR035892 -
Mepo3g02061 525 ProSiteProfiles C2 domain profile. 246 364 IPR000008 -
Mepo3g02061 525 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 247 IPR039010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02061 Mepo-Chr3 30019645 30027348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02061 248 349 Lipid Metabolism Gene Families AT3G61300 33.010 5.34e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02061 - - gmx:100785209 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02061 3 30019645 30027348 Mepo1g03585 1 41731853 41742317 PCT