Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02345 ATGTTAAGCTTAATTCTTGTGTTTGGTGCTGGTGGATTATGTATTGTGTTGTTTTTGTTGGGGATTTCTGAGGATGAGAGGAGGAAAGTTAGTTCTGTTTCCATTGAGGATGTTCCTGCTGTTGTTGATGCTTTTCGGCAATCATTGATCATCGATGAATTGCTTCCTGAGAAGCATGATGATTATCATATGATGCTAAGTTTTCTGATAGCGAGGAAGTTTGATATTGAAAAAGCAAAGCAAATGTGGGCTGATATGCTACAATGGAGGAAGGAGTTTGGTATTGATACAATTATGGAGGATTTTGAGTTCAATGAATTAAACGAAGTTGGCAAATATTTTCCACATGGCTTTCATGGTGTTGATAAGGAGGGAAGGCCTGTTTTCATTAATATTTTACGCGATAGAGTGGATCCAGAACTTCTGCCAGTTACTAGTAGGGATAGATATGTGAAGTACATCATACAGGACAGTGAGAAATTGTTTGCCATAAAGTTTCCTGCTTGCACAATTGCTTCCAAGAGGCACATAGATTCATGCACCGTAATCTTAGATGTTCAAGCTGTGGAATTTTCCGACGTTCTAAACCCTGACAGCGAAATCCGATCGCTAATACAAAAGATTGTTGGTGACAATTACCCTGCTATGACTGATCCGCAAATCTTTATTATAAATGCCAGCCCTGAGTTTAGATATCTGTGTAACAATTACAACAACTCTATTGATCCCGAAATAGCTTCAAAAGTTTGTATGATTCTCAGTGGTAAAGCAAGGCGAGCAGGGCATGCGGTAAAAGTTCTAAACAGTGAAGGCAAGGATGTTGCACATGCTAAGCTACGATGCCAAATGGTAAAAGGCATTGATACTTCCACAGTTGAATCGAGGTCTGAAGCTGAAGATATAGCTTCTCTAAAAGTGAAGAGTTCCTCACACGTTAGGTTGACCCCTGTTCATGCGGAAAATCCTAACAATTGGTCGGACTCGGACCCGTTGGATCCGATGATGAGTGCAATGGAGAACAGAATGAGTGCTTTGGAAAAGCTAGCCAGTGAACAAGGGAAGCTTTTGACTGAGTTGAAAATAGACATGGGGCAAATCAAAGAATTGCTGTTGGAATTCATGAAAAAATCACCTCCCTCAGAAGGTGAAAATGTTGTCAAGAACGTGACAACAGCGGATGACGATGCTGAATATGTTGTTGTCAATTAG 1209 0.4028 MLSLILVFGAGGLCIVLFLLGISEDERRKVSSVSIEDVPAVVDAFRQSLIIDELLPEKHDDYHMMLSFLIARKFDIEKAKQMWADMLQWRKEFGIDTIMEDFEFNELNEVGKYFPHGFHGVDKEGRPVFINILRDRVDPELLPVTSRDRYVKYIIQDSEKLFAIKFPACTIASKRHIDSCTVILDVQAVEFSDVLNPDSEIRSLIQKIVGDNYPAMTDPQIFIINASPEFRYLCNNYNNSIDPEIASKVCMILSGKARRAGHAVKVLNSEGKDVAHAKLRCQMVKGIDTSTVESRSEAEDIASLKVKSSSHVRLTPVHAENPNNWSDSDPLDPMMSAMENRMSALEKLASEQGKLLTELKIDMGQIKELLLEFMKKSPPSEGENVVKNVTTADDDAEYVVVN 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02345 402 SUPERFAMILY CRAL/TRIO N-terminal domain 41 102 IPR036273 -
Mepo2g02345 402 CDD SEC14 104 249 IPR001251 -
Mepo2g02345 402 Pfam CRAL/TRIO domain 113 252 IPR001251 -
Mepo2g02345 402 SMART CRAL_TRIO_N_2 61 86 IPR011074 -
Mepo2g02345 402 SMART sec14_4 106 271 IPR001251 -
Mepo2g02345 402 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 28 252 - -
Mepo2g02345 402 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 106 270 IPR001251 -
Mepo2g02345 402 Gene3D - 36 93 - -
Mepo2g02345 402 Gene3D - 94 273 IPR036865 -
Mepo2g02345 402 SUPERFAMILY CRAL/TRIO domain 106 252 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02345 Mepo-Chr2 33228255 33230762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02345 68 258 Acyl Lipid Metabolism Gene Families AT5G47730 28.061 2.29e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02345 K26544 - fve:101312875 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02345 2 33228255 33230762 Mepo2g02345 2 33228255 33230762 ECH
Mepo2g02345 2 33228255 33230762 Mepo1g02082 1 21432790 21437157 ECH