Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02082 ATGTCTATGTCTGATATTCAATCTCCCAAAGCTCTTGACAAGATTGACCGTGTTGGATCTTTGAAAAAGATGCTGAGGGATTCCCTCACAAGGAGGAGTAGGCGTAGCAGTAGTAAGGTTATGTCAGTTGAAATTGAGGATATCCGCGACGCTGATGATTTGAAAGCCGTTGATGAATTCCGTCAGGCTCTTGTATTGGAAGAATTGCTCCCTGAGAAGCATGATGACTATCATATGCTGCTCAGATTCCTTAGGGCAAGGAAATTTGAAATTGAGAAATCAAAGCAAATGTGGTCTGACATGCTTCAGTGGAGGAAGGAGTTTGGAACTGATACCATTGTTGAGGATTTTGAATTCGAGGAACTTGAGGAAGTGTTGCAATATTATCCTCATGGAAATCATGGAGTAGATAAAGAAGGAAGACCAATCTACATTGAGAGGTTGGGACAAGTTGATGCCACAAAGTTGCTGCAAGTCACAACAATGGATCGATATGTCAAATACCATGTCAAGGAATTTGAGAGAACATTTGATCTCAAGTTTCCAGCTTGTACCATTGCTGCAAAGAAACACATAGATCAAAGCACTACCATTTTGGATGTGCAAGGAGTGGGGCTTAAGAACTTCAACAAACAAGCCAGAGATCTTATCACACGCCTTCAGAAGATTGATGGTGACAATTATCCTGAAACCTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGAATGTTGTGGAATACTATTAAATCTTTCCTTGACCCAAAGACCACCGCAAAAATCCATGTTCTTGGCAACAAGTACCAAAGCAAATTGCTTGAAATAATTGATGCAAGTGAATTGCCAGAGTTTTTAGGAGGTACTTGTACCTGCGCTGATCAAGGAGGCTGCATGCGTTCTGATAAGGGTCCATGGAAGGATCCAGAAATAATTAGGATGGTTCAGAATGGCGAACACAAAACCTCAAGGAAAATTGAGGCTCCAATCGTTGAAGAGAAAACTTCTGAGGAAACCCAGGCTTCCAAAATGGAGGCAGTTTTCACTGCACAATTGTCTACTGTCTATGCCAAGGCCCCTTCTTCAAAAGCTTGCAACTATGAGGATTTGGTCCCTATGGTTGATAAAACTGCTTGGCAGATGGTGGAAAAAACTAAGTCATTTGCAGTACCAAAAGCTGAAGTAGAAGCTTTGACGGTGCCTGATTCGTGCAAGATTCACGAAAAAGTGAACTCGCAGATTTTCACTGGCATGATGGCCTTTGTGATGGGACTCATAACCATGGTGAGAATGACACGAAACATGCCGAAGAGGCTCACTGATGCCAACTTCTACTCAAATTCTGCTTACTCTGGTGGTGACTTTAAAAGTGAAGACTCTAGTGACCAATTGACCAACCCTACCATTTCTGCTCAAGAGTTTATGACTGTTATGAAGCGAATGGCTGAGTTGGAAGATAAAATGGGCAACATGAACACAACTACTTGCATGCCACCTGAGAAGGAAGAAATGCTCAATGCTGCTATAAGTCGCGCTGATGCTCTTGAGCAAGAACTTATGGCAACCAAGAAGGCTTTGGAGGATTCACTTGCCAAGCAAGAGGAGCTTTCAGCTTACATTGAGAAAAAGAAAAAGAAGAAGAAGTTGTTTCAATGGGCATGA 1665 0.421 MSMSDIQSPKALDKIDRVGSLKKMLRDSLTRRSRRSSSKVMSVEIEDIRDADDLKAVDEFRQALVLEELLPEKHDDYHMLLRFLRARKFEIEKSKQMWSDMLQWRKEFGTDTIVEDFEFEELEEVLQYYPHGNHGVDKEGRPIYIERLGQVDATKLLQVTTMDRYVKYHVKEFERTFDLKFPACTIAAKKHIDQSTTILDVQGVGLKNFNKQARDLITRLQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADQGGCMRSDKGPWKDPEIIRMVQNGEHKTSRKIEAPIVEEKTSEETQASKMEAVFTAQLSTVYAKAPSSKACNYEDLVPMVDKTAWQMVEKTKSFAVPKAEVEALTVPDSCKIHEKVNSQIFTGMMAFVMGLITMVRMTRNMPKRLTDANFYSNSAYSGGDFKSEDSSDQLTNPTISAQEFMTVMKRMAELEDKMGNMNTTTCMPPEKEEMLNAAISRADALEQELMATKKALEDSLAKQEELSAYIEKKKKKKKLFQWA 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02082 554 SMART CRAL_TRIO_N_2 76 101 IPR011074 -
Mepo1g02082 554 Pfam CRAL/TRIO domain 127 289 IPR001251 -
Mepo1g02082 554 Gene3D - 22 108 - -
Mepo1g02082 554 Pfam CRAL/TRIO, N-terminal domain 58 100 IPR011074 -
Mepo1g02082 554 SUPERFAMILY CRAL/TRIO N-terminal domain 51 117 IPR036273 -
Mepo1g02082 554 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 121 295 IPR001251 -
Mepo1g02082 554 SUPERFAMILY CRAL/TRIO domain 120 317 IPR036865 -
Mepo1g02082 554 PRINTS Cellular retinaldehyde-binding protein signature 281 290 - -
Mepo1g02082 554 PRINTS Cellular retinaldehyde-binding protein signature 248 267 - -
Mepo1g02082 554 PRINTS Cellular retinaldehyde-binding protein signature 79 101 - -
Mepo1g02082 554 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 14 545 - -
Mepo1g02082 554 CDD SEC14 134 290 IPR001251 -
Mepo1g02082 554 FunFam SEC14 cytosolic factor 109 321 - -
Mepo1g02082 554 Gene3D - 109 320 IPR036865 -
Mepo1g02082 554 Coils Coil 506 537 - -
Mepo1g02082 554 SMART sec14_4 121 292 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02082 Mepo-Chr1 21432790 21437157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02082 55 286 Acyl Lipid Metabolism Gene Families AT5G47730 28.216 8.34e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02082 K26544 - gmx:100785716 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02082 1 21432790 21437157 Mepo1g02082 1 21432790 21437157 ECH
Mepo2g02345 2 33228255 33230762 Mepo1g02082 1 21432790 21437157 ECH