Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01948 ATGTGTGTTTTGTGTTGTGCTCAGTTTTTGTTGAGGGAAATCATGAGTGATGAAGGAGAAAGGACTTGTCCTCTCTGTGCCGAAGAGATGGATTTGACGGATCAGCAGTTGAAACCTTGCAGATGTGGTTATGAGATCTGTGTATGGTGTTGGCACCACATAATGGACATGGCTGAGAAGGATGATACGGATGGGCGATGCCCTGCATGTCGTTCTCCTTATGACAAGGAAAAAATTGTTGGGACAGCGGCAAAATGTGAAAGACTGCTGAATGAAATGAATTTGGAGAAAAAGGTGAAGAATCAGAAAGCCAAGTCTAAATCTTCTGATGGACGGAAGCAGCTCAGTAGTGTTCGAGTGATTCAGCGAAACCTTGTTTACATAGTTGGATTGCCTCTGGATCTGGCAGATGAAGATCTTCTCCAGAAGCGAGAGTATTTTGGTCAGTATGGGAAGGTCTTAAAAGTGTCAATGTCACGCACGGCAGCTGGTGTCATTCAACAGTTTCCTAATGAAACTTGCAGTGTATATATTACTTATTCAAGCGAAGAGGAATCAATTCGGTGTATTCAAAATGTACACGGATTTGTTTTGGAAGGCAGACCTTTAAGGGCATGTTTTGGAACGACAAAATATTGTCATGCATGGCTTCGAAATGCGCCTTGCATCAACCCTGATTGTCTATATTTGCACGAGGTTGGCTCTCAAGAAGATAGCTTTACAAAAGATGAAATAATTTCCGCTTACACCAGAAGTCGAGTTCAACAGATCACCGGTGTCACAAACAGTATGCAACGGCGGTCAGGGAATGTATTACCTCCTCCACTAGATGATTGGACCAATAATTCTACAGAAAAGCCCATTGTTAAAACTGCACCAACTAACTCTGTCTGCGCAGTAAGAAGTTCACCTCCAAATGGAATTAATGGGAGACATGTATCTCTTCCCACCAGTGCTGCTTGGGGCACACAGGCTACAAGTTGTCAGCCCCCTGTTGGAGGTTTATCACATCCCTCTGTGCTGTCCAAGCCAAAACCTGATACAGTCAACAGCATGCATCCCTCTGTCCTGTCCAAGCCTAAACCTGATACAGTCAGCAGCACACTTGCCTTTTCTACTGCTGTTACGGGGACGATTCAGGCTACTGCAGCACAATGTGATGGTTCAAGGAGACCACTATTGAATGATGAGAGTCGTAATACAATACCAAGGGTGAAAAGTGAAATGCCGAAATCTGTTAAACAGTATATTAGCATGGACAGTCTGGCTAGTGCAAGTGAAAAAACTTCAGCTTGTGATGTTTCTCCTGTGCCTGTCAATTTAAAGAACGAGTTGTCTTCTCGGCCATTGTCACGAGATAGTGACAGAGGCAATTGTACTATAGCAAACACATTAAATGCTACTATCATTACTGGACATTCTTTTAGCACCGGTCCTGAGGAAGCAGTGTCTGCTACCAATGAAGTGATACGGAATTTGTCCAGTGAGTTCTCCTCAATTAACATTGATAGAAATACCTCAAATGAACACTGCCGTATAACTAAACCTAGTAGCCTGCCTACTGAACATGTCTTGACTAAATTTCCTCAAATTCAAGAAGGATCACATTATGATGTTGACAAATATAAAGACCTGATAACAACCAATACAGCCGGTAAAACTTCCACATCAGTTAATGGCATTTTTAGTCCAAAGGAACAGTGTGGAGGGATATTGGTTTCACAATCTCAAGTAGTATCGGATGCAGCTGATATCGAAGATGATGTAACATCTTTTGATCATCAAAGACTCAAGGATCCAGAAGTTTGTCTTTCTTATTTGCCTAAGGCAACAAATTTCCTTAATATATCAAAACTCTCTAGCCCTTGTCTAATGCAGTATGGTGAACCTTGTACTGCTGGAAATGATGGTTCTCTATCTTCCAATGATAGAGTTCGGGATGAATCTATTTTACATTCGTCTAGCATGTTATGTAATGGCTATCCTGAGAAATTGATCAGTGGCAGCTCTAATGGTTTACTTCGTGATGAAAGAAACAGGCAAAGCATTGGAAGGTTAGTTGGTGATGCTGTTGATGCTGGGTGTGATGCTGCAATTGATAAGGGCGAAAGTAGCATAATCTCAAATATTCTGTCCCTTGATTTTGATCCCTGGGATGACTCCTTAACATCACCGCATAATATAGTGAAGTTATTGGGTGACAATACTGATAGCCAGCCTTGTCCTTTAAAAACATCTAGTTCTAGGAATGTTCAAAGTAACAATCAGTCAAGGTTCTCTTTTGCAAGGCAGGAAGAATCTAAAATTCAATCTTTTGATATGCATCCGTCTTATACTGTCAGCCAGCAACAGCCTAAGAGTCACATACTCAATCAGAATCTGGCAGAAAAAGATTTTTATATGGAGAAATTGGGCATAGCAAATGGCTTTCCTACCAGTAACTTTGAGGAAGCTGAAAGTATAGGCAATGTTCATTCCATTGCTTCTTCCAATAAGCTTTCTGCTAATTCAAGATTACAAGTTTCAGCTCCACCAGGATTTTCAATTCCAAGCAGGCTTCCACCTCCTGGTTTTTCTTCACATGAGAGATCAGACCAGATTTTTGACTCCCTATCTGGTAATTCATTACTTGATCATTCTTCCTTTTTGAGAAATTCACCTCAGACACTCTCAGCTGGAAATATTGGTGGCACAGGCGAAATTGAATTTATGGATCCTGCTATTTTGGCAGTTGGCAAGGGGAGACTTCAAGGTGCACAGAACAGTCAATCACTGGACGTGCGGTCAAATTTCATGCCACAGTTGAATTATTTCGATAATGAAGCTAGACTACAACTCCTAATGCAAAGATCTCTAGCACAGCAGCAAAACCTTAGATTTTCTGAAATTGGGAATACTTTTTCTCAACTTGGTGATTCATATGGTATTTCTTCAAGGTTGGATCAGTCTCAAGTCAGTAACCTAGCCCCTTATCCTCAGCTGTCTATGCAGCAGTCTACAAATGCAATCTTGTCAAATGGCCAATGGAATGGGTGGAATGAGGTGCAGAGTGGGAATGGTTTGGGTGTGGCTGAACTTTTGAGGAATGAAAGACTTGGATTTAACAAGTTTTACCCAGGATTTGATGATTCAAAATATCGGATGCCAAACTCTGGAGATATCTACAACAGAACATTTGGAATGTGA 3186 0.4127 MCVLCCAQFLLREIMSDEGERTCPLCAEEMDLTDQQLKPCRCGYEICVWCWHHIMDMAEKDDTDGRCPACRSPYDKEKIVGTAAKCERLLNEMNLEKKVKNQKAKSKSSDGRKQLSSVRVIQRNLVYIVGLPLDLADEDLLQKREYFGQYGKVLKVSMSRTAAGVIQQFPNETCSVYITYSSEEESIRCIQNVHGFVLEGRPLRACFGTTKYCHAWLRNAPCINPDCLYLHEVGSQEDSFTKDEIISAYTRSRVQQITGVTNSMQRRSGNVLPPPLDDWTNNSTEKPIVKTAPTNSVCAVRSSPPNGINGRHVSLPTSAAWGTQATSCQPPVGGLSHPSVLSKPKPDTVNSMHPSVLSKPKPDTVSSTLAFSTAVTGTIQATAAQCDGSRRPLLNDESRNTIPRVKSEMPKSVKQYISMDSLASASEKTSACDVSPVPVNLKNELSSRPLSRDSDRGNCTIANTLNATIITGHSFSTGPEEAVSATNEVIRNLSSEFSSINIDRNTSNEHCRITKPSSLPTEHVLTKFPQIQEGSHYDVDKYKDLITTNTAGKTSTSVNGIFSPKEQCGGILVSQSQVVSDAADIEDDVTSFDHQRLKDPEVCLSYLPKATNFLNISKLSSPCLMQYGEPCTAGNDGSLSSNDRVRDESILHSSSMLCNGYPEKLISGSSNGLLRDERNRQSIGRLVGDAVDAGCDAAIDKGESSIISNILSLDFDPWDDSLTSPHNIVKLLGDNTDSQPCPLKTSSSRNVQSNNQSRFSFARQEESKIQSFDMHPSYTVSQQQPKSHILNQNLAEKDFYMEKLGIANGFPTSNFEEAESIGNVHSIASSNKLSANSRLQVSAPPGFSIPSRLPPPGFSSHERSDQIFDSLSGNSLLDHSSFLRNSPQTLSAGNIGGTGEIEFMDPAILAVGKGRLQGAQNSQSLDVRSNFMPQLNYFDNEARLQLLMQRSLAQQQNLRFSEIGNTFSQLGDSYGISSRLDQSQVSNLAPYPQLSMQQSTNAILSNGQWNGWNEVQSGNGLGVAELLRNERLGFNKFYPGFDDSKYRMPNSGDIYNRTFGM 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01948 1061 MobiDBLite consensus disorder prediction 735 760 - -
Mepo2g01948 1061 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 91 IPR013083 -
Mepo2g01948 1061 CDD mRING-HC-C4C4_CNOT4 22 72 IPR039515 -
Mepo2g01948 1061 SMART rrm2_1 125 206 IPR003954 GO:0003676
Mepo2g01948 1061 SUPERFAMILY RING/U-box 15 80 - -
Mepo2g01948 1061 ProSiteProfiles Zinc finger RING-type profile. 23 71 IPR001841 -
Mepo2g01948 1061 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 126 204 IPR000504 GO:0003723
Mepo2g01948 1061 SUPERFAMILY RNA-binding domain, RBD 118 204 IPR035979 GO:0003676
Mepo2g01948 1061 MobiDBLite consensus disorder prediction 846 865 - -
Mepo2g01948 1061 FunFam RNA binding (RRM/RBD/RNP motifs) family protein 125 206 - -
Mepo2g01948 1061 Gene3D - 125 206 IPR012677 -
Mepo2g01948 1061 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 124 210 IPR000504 GO:0003723
Mepo2g01948 1061 CDD RRM_CNOT4 119 218 IPR034261 -
Mepo2g01948 1061 SMART rrm1_1 125 206 IPR000504 GO:0003723
Mepo2g01948 1061 Pfam RING/Ubox like zinc-binding domain 23 75 - -
Mepo2g01948 1061 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 15 1055 IPR039780 GO:0004842|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01948 Mepo-Chr2 28431409 28438669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01948 K10643 - gmx:100813427 1499.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01948 2 28431409 28438669 Mepo6g03768 6 49830239 49838894 PCT