Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01440 ATGTCTTCAAAAATGTGTTGGTTTTTTGGTTTGTTTGTATGTCTTATGTTAAGTGTGTCTTTGTCTACCTCTTCCAAGTTTGATGAACTCTTCCAACCAAGTTGGGCTTTTGACCATTTTCTCCATGAAGGAGATCTCCTTAAACTCAAACTTGATAACTCTTCTGGTGCTGGTTTTGTATCCAAAAGCAAGTATATGTTTGGGAGAGTATCAATCCAGCTTAAGCTTGTTGAAGGTGACTCTGCTGGAACTGTTACAGCTTTCTATATGTCATCAGAGGGTCCAAACCACAACGAGTTTGATTTTGAATTTTTAGGCAACACAACAGGAGAACCTTATTCTGTACAAACAAATGTGTATGTGAATGGAATTGGTAACCGTGAGCAAAGACTTAACCTTTGGTTTGACCCTACCAAAGATTTTCACTCTTACTCTATTTTCTGGAATCAACGTCAAGTTGTATTTTTAGTGGATGAAACTCCAATAAGGGTACACACAAACATGGAACATAGGGGTATACCATATCCAAAGGACCAACCAATGGGTGTATATAGTTCAATATGGAATGCAGATGATTGGGCAACACAAGGAGGAAGAGTGAAAACAGATTGGTCTCATGCACCCTTTATTGCAACTTATAAAGCCTTTGAAATCAATGCTTGTGAGTGTCCAGTTTCAGTGGCTGCAATGGATAATACAAAGAGATGTAGTAGTAATGAAGATAAGAAATATTGGTGGGATGAGCCTAATTTGTCAGTGCTTAATTTGCATCAAAGTCATCAACTTATGTGGGTTAGGAATCATCATATGGTTTATGATTATTGTAGTGATGGTTCTAGGTTTCCTATTACTCCTGTTGAGTGTGTCCATCATCGTCATAGTTAG 885 0.3774 MSSKMCWFFGLFVCLMLSVSLSTSSKFDELFQPSWAFDHFLHEGDLLKLKLDNSSGAGFVSKSKYMFGRVSIQLKLVEGDSAGTVTAFYMSSEGPNHNEFDFEFLGNTTGEPYSVQTNVYVNGIGNREQRLNLWFDPTKDFHSYSIFWNQRQVVFLVDETPIRVHTNMEHRGIPYPKDQPMGVYSSIWNADDWATQGGRVKTDWSHAPFIATYKAFEINACECPVSVAAMDNTKRCSSNEDKKYWWDEPNLSVLNLHQSHQLMWVRNHHMVYDYCSDGSRFPITPVECVHHRHS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01440 294 Pfam Glycosyl hydrolases family 16 31 205 IPR000757 GO:0004553|GO:0005975
Mepo2g01440 294 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 241 288 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Mepo2g01440 294 PIRSF EndGlu_transf 1 293 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mepo2g01440 294 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 22 288 IPR044791 GO:0004553
Mepo2g01440 294 PRINTS Glycosyl hydrolase family 16 signature 57 75 IPR008264 GO:0004553|GO:0005975
Mepo2g01440 294 PRINTS Glycosyl hydrolase family 16 signature 133 150 IPR008264 GO:0004553|GO:0005975
Mepo2g01440 294 PRINTS Glycosyl hydrolase family 16 signature 115 128 IPR008264 GO:0004553|GO:0005975
Mepo2g01440 294 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 292 IPR013320 -
Mepo2g01440 294 CDD GH16_XET 23 288 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mepo2g01440 294 Gene3D - 14 294 - -
Mepo2g01440 294 FunFam Xyloglucan endotransglucosylase/hydrolase 13 290 - -
Mepo2g01440 294 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 19 213 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01440 Mepo-Chr2 21431283 21434789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01440 57 293 Glycoside Hydrolase AT4G03210 73.418 3.51e-139 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01440 K08235 - gmx:100785982 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01440 2 21431283 21434789 Mepo6g03541 6 47628359 47630613 PCT