Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00869 ATGGCAAGCTTGAGAGTTGCATTTGTGGCTGCAATTATGTGCATGGTGGTGGTTAGTGCACCAATGGCAGAGGCAGTCACATGTGGACAGGTAGTAGGTTTCCTAACTCCATGCATTACTTATCTTCAAGGTGGTCCTGGTCCATCTCAAGCATGCTGTGGTGGAGTGAGGAAACTTAACGGTGCCGCCAACAATGGCCCCGCCCGCAAGACTGCTTGCAACTGCTTGAAAAATGCTGCTGGTTCCATTGCTCGTTTGAATAACAACCAAGCTGCTGCTCTCCCTGGCAAATGTGGTGTTAAAATTCCCTACAAGTTTAGCACTGCTACCAACTGTAATAGCATCGGGTTCTAA 354 0.4831 MASLRVAFVAAIMCMVVVSAPMAEAVTCGQVVGFLTPCITYLQGGPGPSQACCGGVRKLNGAANNGPARKTACNCLKNAAGSIARLNNNQAAALPGKCGVKIPYKFSTATNCNSIGF 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00869 117 Gene3D - 25 117 IPR036312 -
Mepo2g00869 117 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 4 113 IPR000528 GO:0006869|GO:0008289
Mepo2g00869 117 ProSitePatterns Plant lipid transfer proteins signature. 94 115 IPR000528 GO:0006869|GO:0008289
Mepo2g00869 117 CDD nsLTP1 26 113 - -
Mepo2g00869 117 Pfam Protease inhibitor/seed storage/LTP family 28 112 IPR016140 -
Mepo2g00869 117 SMART aai_6 28 112 IPR016140 -
Mepo2g00869 117 PRINTS Plant phospholipid transfer protein signature 103 114 IPR000528 GO:0006869|GO:0008289
Mepo2g00869 117 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Mepo2g00869 117 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Mepo2g00869 117 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Mepo2g00869 117 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Mepo2g00869 117 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 115 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00869 Mepo-Chr2 11121909 11123685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00869 8 115 Acyl Lipid Metabolism Gene Families AT5G59320 45.370 2.00e-27 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00869 - - psat:127108121 149.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g00869 2 11121909 11123685 Mepo3g01909 3 28070686 28071870 PCT