Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01697 ATGGCTGTTCAAGCTCAATATCCATCAAATATTCTTCTTCTAAACAACAATAACAGCAGAAATGGACAAGAAGGACATGAATACTCCTTACAACAACAACAACAACTATCACTTCTTGATCATTCTCATAATATCCTATGCAACAATAACAACACAAGTACAAATTCTCGCAAGAGAGGAAGAGAAGGAACATCCCCTAACGTTATTAATCATTTCTCTTTACAACCTCAACCTTCTCAAATTATTCATCTTTCTCAACTCCATAATCATCATCAACAACAACAACAACAACAAAATGTTGTCTCTACTGGCCTTCGTTTATCATTCGATGATCATCAACAACAACAACAGCAAAGATTACAATTACAACTTCATCAACAACAACAACAACAGCAGCAACAACAAGGTTGTCACTCTTCATCTTTCTCATCTCTATTACCACAAGGACTCATTTCTCAAATGAAACAACAACACGATGAATTAGACCAATATCTTCAAACCCAGGGAGAAAATCTACGACGGACATTGGCGGAGAAGAGGCAAAAACATTACCGGGAGCTACTAAACGCGGCGGAGGAAGCGGTGGCGCACCGGTTAAGAGAAAAAGAAGTGGAATTCGCAAAAGCCACGCGCAGGAACGCGGAGTTAGAAGCGCGTACGGCCCAGTTAACAATGGAAGCCCAAGTATGGCAGGCTAAAGCCCGGGCCCAAGAAGCCGCCGCAGCTTCTCTGCAAGCCCAGCTGCAACAGACAATAATGTGCGAAGATGCCGGCGGAGGCGGTGTTTCATGCGGTGTGGAAGGACAGGCTGAGGATGCTGAATCGGCTTATATTGATCCGGATAGAGTGGTGGAAGTTGCGGCGGCGCGTGGGAAATGTAGAGGGTGTGAAAAGCGCGTGGCAACGGTGGTTGTTTTACCTTGTCGGCATTTGTGTGTTTGTACAGAATGCGATGCGCATTTCAGAGTTTGCCCTGTTTGCTTTACTCCCAAGAATTCAACCGTTGAGGGATTAGGCATATGGTATGGAATATAG 1035 0.4425 MAVQAQYPSNILLLNNNNSRNGQEGHEYSLQQQQQLSLLDHSHNILCNNNNTSTNSRKRGREGTSPNVINHFSLQPQPSQIIHLSQLHNHHQQQQQQQNVVSTGLRLSFDDHQQQQQQRLQLQLHQQQQQQQQQQGCHSSSFSSLLPQGLISQMKQQHDELDQYLQTQGENLRRTLAEKRQKHYRELLNAAEEAVAHRLREKEVEFAKATRRNAELEARTAQLTMEAQVWQAKARAQEAAAASLQAQLQQTIMCEDAGGGGVSCGVEGQAEDAESAYIDPDRVVEVAAARGKCRGCEKRVATVVVLPCRHLCVCTECDAHFRVCPVCFTPKNSTVEGLGIWYGI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01697 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 337 IPR013083 -
Mepo1g01697 344 ProSiteProfiles Zinc finger RING-type profile. 293 327 IPR001841 -
Mepo1g01697 344 Pfam Zinc finger, C3HC4 type (RING finger) 291 331 - -
Mepo1g01697 344 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 44 336 IPR017066 -
Mepo1g01697 344 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 272 338 - -
Mepo1g01697 344 Coils Coil 199 233 - -
Mepo1g01697 344 PIRSF SBP1_RNase_bind 1 121 IPR017066 -
Mepo1g01697 344 PIRSF SBP1_RNase_bind 119 338 IPR017066 -
Mepo1g01697 344 CDD mRING-HC-C3HC5_CGRF1-like 291 327 - -
Mepo1g01697 344 FunFam Baculoviral IAP repeat containing 7 302 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01697 Mepo-Chr1 16742053 16744299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01697 K19042 - gmx:100788924 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01697 1 16742053 16744299 Mepo1g01697 1 16742053 16744299 ECH
Mepo5g00544 5 4777636 4779835 Mepo1g01697 1 16742053 16744299 PCT