Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00722 ATGCTAGTGGCATTGGTCTTGCTGCTGCTGGCATTGAGCAATGAAGTGAGAGTGAATGGTGAAAGAGGTGATAGGCAATGTGGGTTCAATCCATCACTTAAGCCAAGACCACACAGTGTATCCATTTTGGAGTTTGGTGCAGTTGGTGATGGTAAAACATTGAACACCATTGCATTTCAGAATGCCATCTTCTATCTCAAGTCATTTGCCGATAAAGGTGGTGCTCAGCTATATGTACCCCCTGGAACATGGCTTACTCAAAGTTTCAATCTCACTAGCCATCTTACCCTCTTTTTGGAAAAAGGCGCAGTCATTATCGGATCTCAGGATCATTATAACTGGGAGGTTCTTGATCCTTTACCGTCTTATGGCCGCGGACTTGAAGTTCCCGGAGGAAGATATCAGAGCTTGATAAATGGATACATGTTACAAGATGTGGTCATAACAGGTAATAATGGAACCATTGATGGTATGGGATCGACTTGGTGGGAATCATTTAGCTCTCACTCCTTGAACTACAGCCGTCCTCATCTGGTTGAATTAGTAGCATCTACTGATGTGGTAGTTTCAAATCTGACATTCTTGAACGCCCCTGCATATAACATTCACCCAGTTTATTGCAGAAATGTACATATTCATAATATTTCAATCTTTGCTCCTCCAGAATCCCCTTATACTGTTGGCATAGTACCAGATTCTTCTGATCATGTTTGCATAGAGGATTGTACCATTGCCACCGGCTATGATGCAATTGCCCTTAAAAGCGGTTGGGACGAGTATGGAATTGCCTATGGTAGGCCTACTGAGAATGTACACATCAGAAGGGTGCATCTACAAGCATCTTATGGCTCTACTCTTGCATTTGGTAGTGACATGTCAGGTGGAATTTCAAATGTCTTTGTAGAACATGTTCATCTCTATAACTCAAAAGGTGGCATTGAGTTCAGAACTATTAGAGGAAGAGGTGGTTATATGAAGGACATAATTTTGTCAGACATAGAAATGAAGAATATATATAGAGCAATATCAGCCACAGGTTACTGTGGTTCTCATCCTGATGACAAATTTGATCCTAATGCTTTACCCCTTTTGGATCACTTTATTTTCCAAGATATAATTGGAACAAACATCACAATTGCTGGAAGCTTTGCTGGACTACAAGAATCTCCATTCACCAACATATGCTTATCCAATATAACCCTTTCTGTAAATTATGCTTCCTCCACTAGTTGGGAATGTTCAAATGTATCTGGATTTTCAGATTCTGTTCTCCCTAAACCTTGTCCTGATCTTGACAGCCCTTCAAATTATTCCTCATCTTGTCTCTCCAAGTTGACTATGAAAGGGAAAATTGCGGTGTCCGGCTCGGTGTCGATGTAA 1380 0.4101 MLVALVLLLLALSNEVRVNGERGDRQCGFNPSLKPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLTSHLTLFLEKGAVIIGSQDHYNWEVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVITGNNGTIDGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNIHPVYCRNVHIHNISIFAPPESPYTVGIVPDSSDHVCIEDCTIATGYDAIALKSGWDEYGIAYGRPTENVHIRRVHLQASYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSDIEMKNIYRAISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFTNICLSNITLSVNYASSTSWECSNVSGFSDSVLPKPCPDLDSPSNYSSSCLSKLTMKGKIAVSGSVSM 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00722 459 SUPERFAMILY Pectin lyase-like 32 431 IPR011050 -
Mepo1g00722 459 PANTHER PECTIN LYASE-RELATED 6 436 - -
Mepo1g00722 459 Gene3D - 30 422 IPR012334 -
Mepo1g00722 459 SMART pbh1 234 255 IPR006626 -
Mepo1g00722 459 SMART pbh1 207 233 IPR006626 -
Mepo1g00722 459 SMART pbh1 268 290 IPR006626 -
Mepo1g00722 459 SMART pbh1 296 317 IPR006626 -
Mepo1g00722 459 SMART pbh1 184 206 IPR006626 -
Mepo1g00722 459 SMART pbh1 325 346 IPR006626 -
Mepo1g00722 459 Pfam Glycosyl hydrolases family 28 137 417 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00722 Mepo-Chr1 6911719 6915126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00722 1 431 Glycoside Hydrolase AT3G06770 60.998 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00722 - - gmx:100802343 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00722 1 6911719 6915126 Mepo1g00722 1 6911719 6915126 ECH
Mepo1g00722 1 6911719 6915126 Mepo6g01437 6 15601082 15605047 PCT