Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2481 ATGGCAATGAAAACAAAAAACAACAAGGTGGGAAATGAATTTGGTTGTGGTTTCATGGAGAGAATTTTCAATCTCAAAAGTCCAAGGCTAAGAAATTCATTAGTTCATTCCCTACCAATGAAAACTAACAACAATGATCATGTCAAAAATGAACCAAAAATGTCTCCAAATAAAGAACCAAAGGTTCAACAAAGAAACTCCAACAGCACTACACTTATTGAAAATCGGAAGCGCATTTCTGATGCTACTTCAAGAAGCTCGGCATCATCATCGTCCACTGGTAGTTCAACCCACAAAAGGGTTGAACGAAACCAGAATACTAATGATGATGCCAAGCTTCAGATAGAATCAAAACTACAACTCACTAGGATAAGCACCGTTCGCCAGTGTGACAACGAGAGCAACAAGTCTATAACCAAAGAATTTGCTCCCTTGAAACTCACTGGAAATTTGCTTGTGAGTAACACACCAAGAAGAAAGAGTGTTGAATGTTTACCTAAGCATTCAGAGTTAAACTCTGTCTCAGGTTTTTACAATAGTAATAGTAATGGAAGAAAAGTGGTTATGGGAAATATTATGAGGAAGAATAGTAATGAACTTGCACAGTTTCTAAGTCAAAGGCACAATATTGTTGAACCTGAAGTGTTGAAATCTATGGGAAATGAAGCATACAAAAAGGGTAATTTTGAAGAAGCTTTGGCTTTGTATGACAAAGCAATTGCTGTTGATTCAAATAAAGCAACTTATCATTGCAATAAGAGTGCAGCTTTGATTGGATTAGGAAGGTTTCAAGAAGCAATTCTTGAGTGTGAGGAATCTATTCGGTTGGATCCTTCTTATAACAGAGCTCATAATCGTTTGGCAACAATATATTTCAGATTAGGAGAAGTAGAAAAGGCCCTGGATTGCAACCGATCAACCTCAAATGTTGATTCTGTACTTGCTTTTCAATCTCAGGCTCTACAAAATCACATTAACAAATGTGTTGAGGCTAGGAAATTCAATGAATGGAGTGTTGTATTAAAGGAAACACATTCAGCATTATCCTTAGGTGCTGATTCAGCTCCACAGATCTATGCTTTGCAAACTGAAGCCTTGCTGAAGCTCGTAAGGTACCAAGAGGCGTATGCTGTGTATAACAACATGCCAAAATTTTCAGTTGATTGGTGTAACAAGATATTTGGCATGGAAACTAGTGCTTACCTGTTGATGATAGGCGCCCTGGTTTACTTAGCATCCGGCAGGTTTGAGGATGCTGTGAAAACAACTCAGCAAGCAGCTAGGGTTGATCCAAGCAACAGAGAGGTTAATGGAGTGTTAAGGAGAGCCAGAGCAGTGACATCAGCTAGAATGAGTGGAAACTTACTCTTCAAGGCATCAAAATTCATGGAAGCATTAGCAGTATACAATGAAGGACTAGATCATGATCCACACAACTCAGTTCTGCTATGCAACAGAGCAGCATGTCGTTCTAAGCTAGGTCAATACGAAAAAGCAATTGAAGATTGTGATGCAGCACTTATGCTTAATCCATGTTATAGCAAAGCAATGCTAAGGAGGGCATATTGTAATGCCAAGTTGGAACGATGGGAAGTTGCCATTCAAGACTATGAAATGTTGATAAGAGAAAAGCCAGGGGATGAAGAAGTTGCAAGGGCTTTGTTTGAGGCACAAATCCAAGTCAAGATGATACGTGGCGAAGATATTAAGGATTTGAAATTTGGTTCAAATTTGGTTTGCATCTCAAGTAACGATCGTTTCAGACATTATGTAACCTCACCTGGTATGGCTGTTGTGCTCTTTAGTAACAAGGGAACACACAGACAAGTGTTGATGGTGTTGGAGCAAACTAGCAAGAGATTCCCATCTGTTAATTTCCTCAAGGTTGAGATTGAAGACCACCCGTACTTGGTGAAATCGGAAGGTGTGAGATCATTCCCAGCTTTCAAAATATACAAGAATGGATCAAGGGTTAAAGAGATTTCAGGCAACCAACACGAGCTGTTAGAAAGATCAGTTAAATTGTATAGCAGCTGA 2037 0.3908 MAMKTKNNKVGNEFGCGFMERIFNLKSPRLRNSLVHSLPMKTNNNDHVKNEPKMSPNKEPKVQQRNSNSTTLIENRKRISDATSRSSASSSSTGSSTHKRVERNQNTNDDAKLQIESKLQLTRISTVRQCDNESNKSITKEFAPLKLTGNLLVSNTPRRKSVECLPKHSELNSVSGFYNSNSNGRKVVMGNIMRKNSNELAQFLSQRHNIVEPEVLKSMGNEAYKKGNFEEALALYDKAIAVDSNKATYHCNKSAALIGLGRFQEAILECEESIRLDPSYNRAHNRLATIYFRLGEVEKALDCNRSTSNVDSVLAFQSQALQNHINKCVEARKFNEWSVVLKETHSALSLGADSAPQIYALQTEALLKLVRYQEAYAVYNNMPKFSVDWCNKIFGMETSAYLLMIGALVYLASGRFEDAVKTTQQAARVDPSNREVNGVLRRARAVTSARMSGNLLFKASKFMEALAVYNEGLDHDPHNSVLLCNRAACRSKLGQYEKAIEDCDAALMLNPCYSKAMLRRAYCNAKLERWEVAIQDYEMLIREKPGDEEVARALFEAQIQVKMIRGEDIKDLKFGSNLVCISSNDRFRHYVTSPGMAVVLFSNKGTHRQVLMVLEQTSKRFPSVNFLKVEIEDHPYLVKSEGVRSFPAFKIYKNGSRVKEISGNQHELLERSVKLYSS* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2481 678 SMART tpr_5 514 547 IPR019734 GO:0005515
Mal8g2481 678 SMART tpr_5 480 513 IPR019734 GO:0005515
Mal8g2481 678 SMART tpr_5 213 246 IPR019734 GO:0005515
Mal8g2481 678 SMART tpr_5 400 433 IPR019734 GO:0005515
Mal8g2481 678 SMART tpr_5 281 314 IPR019734 GO:0005515
Mal8g2481 678 SMART tpr_5 247 280 IPR019734 GO:0005515
Mal8g2481 678 SMART tpr_5 446 479 IPR019734 GO:0005515
Mal8g2481 678 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 677 - -
Mal8g2481 678 CDD TRX_family 587 663 - -
Mal8g2481 678 Pfam Tetratricopeptide repeat 482 511 IPR001440 GO:0005515
Mal8g2481 678 Pfam Tetratricopeptide repeat 257 301 - -
Mal8g2481 678 Pfam Tetratricopeptide repeat 407 479 - -
Mal8g2481 678 Pfam TPR repeat 220 252 - -
Mal8g2481 678 ProSiteProfiles TPR repeat profile. 213 246 IPR019734 GO:0005515
Mal8g2481 678 Gene3D Tetratricopeptide repeat domain 212 565 IPR011990 GO:0005515
Mal8g2481 678 Gene3D Glutaredoxin 571 677 - -
Mal8g2481 678 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 677 IPR044534 -
Mal8g2481 678 SUPERFAMILY TPR-like 451 562 IPR011990 GO:0005515
Mal8g2481 678 Pfam Tetratricopeptide repeat 516 545 IPR019734 GO:0005515
Mal8g2481 678 Pfam Thioredoxin 587 669 IPR013766 -
Mal8g2481 678 SUPERFAMILY Thioredoxin-like 529 670 IPR036249 -
Mal8g2481 678 ProSiteProfiles TPR repeat profile. 400 433 IPR019734 GO:0005515
Mal8g2481 678 MobiDBLite consensus disorder prediction 36 113 - -
Mal8g2481 678 MobiDBLite consensus disorder prediction 59 101 - -
Mal8g2481 678 SUPERFAMILY TPR-like 213 435 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2481 Mal-Chr8 55564834 55568635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2481 213 544 Glycosyltransferase AT3G04240 21.598 3.20e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2481 K09527 - gmx:100791862 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2481 8 55564834 55568635 Mal8g2481 8 55564834 55568635 ECH
Mal8g2481 8 55564834 55568635 Mal2g2538 2 32237696 32241032 PCT