Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2538 ATGGAAGGAAAAACCAATAAGAACAAGGTAGAAAAAGTTGTATTAGGCTGCAGTTTCATGGGAAAAATCTTCAAACTCAAAACCAAAAAGCTCAGAAATTCATCATCTGTTCATTCACTACCAATCAAGACAATTAACAATCCACAGCAAAAAGAATCAAAAGGGTCACCTAAACATGAGTCAAAAGTTCCAACAGAGCCTCAACCACGAAAAAGCGTCGCTTTTTCTCACACACCTACAGATTCTGCAAGAAGCTCAATTCAACAGAAAGAGCCTAATAGTAATTCCTTAGGACTTGCAAGAATAAGTACTAGTACTAGTACTACTACTACTACTCGTCCGCGCGACAGCGAAACAAAGTCACCAAGCAAAGATTTGAGCACACCAAAACTCACTGGGAATTTGCTTATGAATAGTAGCTATAGCAGTCCAAGAACAAGTGTTACAAAGAGTAATAAAGAGCTGAATTCTGTGTCATGTACTGTGAATAATAGTGTAATGGGGAATATAATGAGGAAAAGTGGTGATGGTGTGTCACAGTTTCGAAGTCCTAGAAGCAACAGAGTTCTAGACCCTGAGGTATTGAAATCAATGGGAAATGAAGCATACAAACAAGGAAGATTTTCAGAGGCTTTGGCTTTGTATGAACGAGCTATTGCTATTGATTCTAATAAGGCAACGTATCATTGTAATAAGAGTGCTGCTTTAATCGGTTTGGGTAGGTTTCAACATGCAATTGTTGAGTGTGAGGAAGCTATTAGGATTGAACCTTCCTATGCTAGAGCTCATAGCCGTTTGGCAACAATATATTTCAGGTTGGGAGAAGCAGAAAAGGCATTGAATTGCAATAAAGAAACTCCGTATTTTGATTTGGAACTTGCTTTCCAAGCTCAGGCGCTTCAAGTTAACTTTAACAAATGCAGTGAGGCCAGGAAAGTCAAGGATTGGAAAGTTATATTGAAGGAAACACAGTCTGCAATATCCTTAGGTGTGGATTCAGCTCCAAAGGTCTATGCTTTACAAACTGAAGCCTTGTTGAAGCTCCTAAGGCATCAAGAAGCATATACAATATACAAGAAAATGCCAAAACTTGACCTTGATTGGTGTAACAAATTATTTGGACCAGTTTCTAGTGCTTACCTTTTGATGATAGGTGCACAAGTTTACTTGGCAGCCGGCAGGTTTGAGGATGCCGTGACAGCATCACAGAAAGCGGCTAAACTTGATCCAAGCAACATCGATGTGAATGCAGTGGTAAGAAGGGCAAGAGCCGCGGCAGCTGCTAGATTAAGTGGTAACTTGCTCTTCAAGGCATCAAAGTTCAAGGAAGCATGTGCGGTATACAATGAAGGACTAGAGCATGATCCATTCAACTCAGTTCTTCTATGTAACAGGGCAGCATGCCGTTCTAAGCTAGGCCAATTTGAGAAAGCAATTGAAGATTGCAATGTAGCTCTTACAGTTCAGCCTAGTTATAGCAAGGCAGTGTTGCGGCGAGCTGATTGCAATGCCAAGTTGGAAAGATGGGAAGCTGCTATTCAAGACTATGAAATGTTGATAAGAGAAAAGCCAGGGGATGAGGAGGTTGCTAGAGCTTTGTTTGAGATTCAGCTAAAACTCAAAATGCTACGTGGCGAAGATATTAAGGACTTGAAATTTGGTTCAAATTTGGTTTGCATTTCAAGCAATGAAAAGTTTAGACATTATGTAACCTCACCTGGTATGTCTGTGGTACTCTTTTGCAACAAGGACACACATAATAAGCAAGTATTGTTGGTGTTGGAGCAAACCTGCAAGAGATTCCCATCAGTTAATTTTCTTAAGGTGGAGATTGAGGACCACCCTTACTTGACAAAATCAGAAGGTGTAAACTCTTTCCCAGCCTTCAAAATATACAAGAATGGATCAAGGGTTAAAGAAATTTCAGGAAACAATCATGAGTTGCTAGAAAGATCAGTTAAACTATATAGCAGCTGA 1977 0.3986 MEGKTNKNKVEKVVLGCSFMGKIFKLKTKKLRNSSSVHSLPIKTINNPQQKESKGSPKHESKVPTEPQPRKSVAFSHTPTDSARSSIQQKEPNSNSLGLARISTSTSTTTTTRPRDSETKSPSKDLSTPKLTGNLLMNSSYSSPRTSVTKSNKELNSVSCTVNNSVMGNIMRKSGDGVSQFRSPRSNRVLDPEVLKSMGNEAYKQGRFSEALALYERAIAIDSNKATYHCNKSAALIGLGRFQHAIVECEEAIRIEPSYARAHSRLATIYFRLGEAEKALNCNKETPYFDLELAFQAQALQVNFNKCSEARKVKDWKVILKETQSAISLGVDSAPKVYALQTEALLKLLRHQEAYTIYKKMPKLDLDWCNKLFGPVSSAYLLMIGAQVYLAAGRFEDAVTASQKAAKLDPSNIDVNAVVRRARAAAAARLSGNLLFKASKFKEACAVYNEGLEHDPFNSVLLCNRAACRSKLGQFEKAIEDCNVALTVQPSYSKAVLRRADCNAKLERWEAAIQDYEMLIREKPGDEEVARALFEIQLKLKMLRGEDIKDLKFGSNLVCISSNEKFRHYVTSPGMSVVLFCNKDTHNKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLTKSEGVNSFPAFKIYKNGSRVKEISGNNHELLERSVKLYSS* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2538 658 ProSiteProfiles TPR repeat profile. 192 225 IPR019734 GO:0005515
Mal2g2538 658 MobiDBLite consensus disorder prediction 71 116 - -
Mal2g2538 658 MobiDBLite consensus disorder prediction 29 154 - -
Mal2g2538 658 MobiDBLite consensus disorder prediction 33 52 - -
Mal2g2538 658 CDD TRX_family 564 645 - -
Mal2g2538 658 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Mal2g2538 658 Pfam Tetratricopeptide repeat 386 458 - -
Mal2g2538 658 Pfam Tetratricopeptide repeat 471 526 - -
Mal2g2538 658 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 657 IPR044534 -
Mal2g2538 658 Pfam Thioredoxin 562 649 IPR013766 -
Mal2g2538 658 Pfam TPR repeat 199 234 - -
Mal2g2538 658 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 657 - -
Mal2g2538 658 MobiDBLite consensus disorder prediction 124 154 - -
Mal2g2538 658 SUPERFAMILY TPR-like 425 541 IPR011990 GO:0005515
Mal2g2538 658 SUPERFAMILY TPR-like 191 415 IPR011990 GO:0005515
Mal2g2538 658 SMART tpr_5 260 293 IPR019734 GO:0005515
Mal2g2538 658 SMART tpr_5 379 412 IPR019734 GO:0005515
Mal2g2538 658 SMART tpr_5 425 458 IPR019734 GO:0005515
Mal2g2538 658 SMART tpr_5 192 225 IPR019734 GO:0005515
Mal2g2538 658 SMART tpr_5 459 492 IPR019734 GO:0005515
Mal2g2538 658 SMART tpr_5 493 526 IPR019734 GO:0005515
Mal2g2538 658 SMART tpr_5 226 259 IPR019734 GO:0005515
Mal2g2538 658 SUPERFAMILY Thioredoxin-like 543 650 IPR036249 -
Mal2g2538 658 Gene3D Tetratricopeptide repeat domain 191 544 IPR011990 GO:0005515
Mal2g2538 658 Coils Coil 499 519 - -
Mal2g2538 658 Gene3D Glutaredoxin 551 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2538 Mal-Chr2 32237696 32241032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2538 204 523 Glycosyltransferase AT3G04240 21.131 2.97e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2538 K09527 - gmx:100787041 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2481 8 55564834 55568635 Mal2g2538 2 32237696 32241032 PCT