Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2435 ATGAAGAGGGAGACGAGAATGAAAATGAGATTGAAAGTAAAAGTTCACCCTCAATCAAGAGGGAACTCTCAGATTTTGATCTTCAATTCGATGAACCAGTTGCAAGCAAAGAAGGGTATGATCCAACTGATAAAGACCGAGCCACCGGTGAATTTGAAGATCAAAGCGATAGGTACAGCCGAAAGAGTACAGATACAGTCAACAGTGGACATGCAGATAAATGAATACTCGTCTCCTTTGCAGTCACAGTCTTTTGAAGACTTTCGCGATTTATCAACAAACCCAATGGTTAATCTTAAGAGGTCTAGGTCTATGAGAAGTCACTGCAGTGCTGATAGAGTGATGTTGAAAAGGCATTCTTCAAGTCAAGTACTCCCTTCTGGAAGTAAAAAATTGTGGTGGAAGTTGTTCTTATGGAGCCACAGGAATATACATAGAAGATTCTATAGAAAATCAAAACTAGTTCCTGCTATTAGCTCCTTAAGCAATCAATTAGGGTATTCTTCAGACACCCTTGAACCAAAACAAATCAAGGCACTGAGACACGTGCAATCGTCTGCGTCAATTATTGTGCATGCCCCTAGCAAAAGCATCAATGGTGATGATCAAAGGCAGAGCAGATTTCAAAACCAATGGTTTGCTTTTTCGACAGAGACTTCTTCTTATGCGAGGGTGGATGCATGGATCAAAGCTCTTGAAATTCAGGAACCAGTGCCGGAAGACGATCCTCTTGATGACAATGCCGGAAGCATTTCCTTCCCACCTTCTCCTGATGCGGGTAGATCAATAAGAAGCACTTCTCAACTGACTCATTCAAATTCCAATCTTCCAAAGGATATTTTGTTAGCCAATAGTATGGTCCAGTCTCTAAATCCAGATTCATCGGTTGCTCACATATCCGGTGTTAGTATAAAAGCCATCCCTTTGATTTCACACTTTTCCAATCTCCGCTCAGTCAATCTGTCCAACAATTTCATAGTCACAATCTCACCAGGATGTCTACCAAAGAGTGTTCAAACACTTAATTTGTCAAGAAACAAGATTAGCACCATTGAGAGCTTCAAAGAATTGACCCGGTTGAGAGTACTTGACCTAAGTTACAACTGCATCTCAAGAATTGGACAAGGTTTGTCAAGCTGTACAATTATCAAAGAGCTATATCTTGCTGGGAACAAGATAAGTGATGTTGAGGGGCTTCATAGGTTGTTTAAGCTAACAGTTCTGGACTTGAGCTTCAACAAAATCACAACAACAAAAGCATTAGGCCAGCTAGTGGCTAACTACAACTCACTCCAGGCACTTAATCTTCTCGGAAATGCTATTCAGAGAAACATCGGTGATGAACAACTAAACAAAGCAGTATCCGGACTCCTTCCAAAGCTGGTGTACCTGAACAAACAACCGCTCAAGGCTAAAAGGGCGATGCGGGAAATATTAACTGATAGTGTTGCCAAAGCTGCACTTGGGAACAGCAAGAAGCGGAGCTACGTAAAAAGATCGGTAAGCCAAGGAGGATCAAGTTCCAGCAGAGGTCATAGAAGCAGTGCAAGTGTTGCACCGAAAAGCAGGAACCGGAAAAGAAGGTGA 1587 0.419 MKRETRMKMRLKVKVHPQSRGNSQILIFNSMNQLQAKKGMIQLIKTEPPVNLKIKAIGTAERVQIQSTVDMQINEYSSPLQSQSFEDFRDLSTNPMVNLKRSRSMRSHCSADRVMLKRHSSSQVLPSGSKKLWWKLFLWSHRNIHRRFYRKSKLVPAISSLSNQLGYSSDTLEPKQIKALRHVQSSASIIVHAPSKSINGDDQRQSRFQNQWFAFSTETSSYARVDAWIKALEIQEPVPEDDPLDDNAGSISFPPSPDAGRSIRSTSQLTHSNSNLPKDILLANSMVQSLNPDSSVAHISGVSIKAIPLISHFSNLRSVNLSNNFIVTISPGCLPKSVQTLNLSRNKISTIESFKELTRLRVLDLSYNCISRIGQGLSSCTIIKELYLAGNKISDVEGLHRLFKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNAIQRNIGDEQLNKAVSGLLPKLVYLNKQPLKAKRAMREILTDSVAKAALGNSKKRSYVKRSVSQGGSSSSRGHRSSASVAPKSRNRKRR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2435 528 MobiDBLite consensus disorder prediction 239 271 - -
Mal8g2435 528 Gene3D Ribonuclease Inhibitor 246 378 IPR032675 -
Mal8g2435 528 ProSiteProfiles Leucine-rich repeat profile. 382 403 IPR001611 GO:0005515
Mal8g2435 528 Pfam Leucine Rich repeat 404 416 IPR001611 GO:0005515
Mal8g2435 528 ProSiteProfiles Leucine-rich repeat profile. 404 425 IPR001611 GO:0005515
Mal8g2435 528 ProSiteProfiles Leucine-rich repeat profile. 359 381 IPR001611 GO:0005515
Mal8g2435 528 SUPERFAMILY Outer arm dynein light chain 1 303 465 - -
Mal8g2435 528 SMART LRR_sd22_2 402 423 - -
Mal8g2435 528 SMART LRR_sd22_2 357 379 - -
Mal8g2435 528 SMART LRR_sd22_2 380 401 - -
Mal8g2435 528 SMART LRR_sd22_2 335 356 - -
Mal8g2435 528 PANTHER NISCHARIN RELATED 69 527 - -
Mal8g2435 528 MobiDBLite consensus disorder prediction 489 528 - -
Mal8g2435 528 MobiDBLite consensus disorder prediction 495 518 - -
Mal8g2435 528 SMART LRR_typ_2 313 336 IPR003591 -
Mal8g2435 528 SMART LRR_typ_2 357 380 IPR003591 -
Mal8g2435 528 SMART LRR_typ_2 402 424 IPR003591 -
Mal8g2435 528 Pfam Leucine rich repeat 314 368 IPR001611 GO:0005515
Mal8g2435 528 Gene3D Ribonuclease Inhibitor 379 475 IPR032675 -
Mal8g2435 528 ProSiteProfiles Leucine-rich repeat profile. 337 358 IPR001611 GO:0005515
Mal8g2435 528 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 69 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2435 Mal-Chr8 53963172 53965178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2435 308 502 Receptor kinase-like Gene Family AT5G56040 29.630 1.26e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2435 - - gmx:100813969 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2435 8 53963172 53965178 Mal8g2435 8 53963172 53965178 ECH
Mal8g2435 8 53963172 53965178 Mal2g2516 2 31878395 31880689 PCT