Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2516 ATGGACATGTGTAGGTGTGTCTCTGTTTTGATTGGAAGGAAGGATAAAATCAAGGGCATTGAAGGAACTTCAAAAGGGGACCTCAAAAAGTTACATGCCAAAGTACAACACCCAACGATATCTTCGAAGAGTCGGGGTATAAAGCCAGATGACACTCATGATGTTACAACCGGTGGCACCCAGATGAATTCAAGGTGCAATGTGAAAGTTACGAATCTTGGGAGTCCTATGAAGACTGAAGTAGAGGAAGCTTATGAAGGGGAAGATGAGCATGAAGATTCACCCTCCATCAAGAGAGAGCTCTCTGATTTTGATCTCCAAGTTCATGAAGCTGTTGCAAGCAAAGTAGGATATGACCCAACAGGTAAAGAGATTCACTCCCCCGGTTTGTATAAAAAACAAACCAACATTCAATTGGAAGACACAGATGATAAATACGACAAAAACAGTGTTGATTTAATCCAAAGTGGACATGTCAGTGATCCTGGGATGGCCAAGCCTGACTTCTGGGCTTCTCCAGAGCTCAAGCGATCTTGCTCTAACCTGGAAAGAAGGAATATATTTAGGAAGACAGCTCATCACTTTCCATCTTCAAAGTCACATTCTTTTGAGGATTTGCAGGAATTAACAGCAAATCAGATGGTTAATCTAGAGAGCCCCAGGTCTGTGATGACTCAGCGCAGTGCTGATAGAGTGATGTTGAAAAGGCGTTCGTCTAGTCAAGTTCTCCCTTCTGGAAGTAAAAAACTGTGGTGGAAGTTGTTCCTCTGGAGCCACAGGAATATTCATCAACCTTGGGTCAGCAAATCAACACAATTACATACTGCAAGTGCTGTTTTTAATAGTCAATGCGGGTACTCTTCAGACATCCTGGAACCAAAACAAGGTAAGACATTGAGACATGTGGGATCACCCTCTCATGCATCATCTTCGGGGGAGTACTTTAGCAAAAGCGGCAAGGATAAAAATATTGATAAACAAAGGTGGAGCAGATTTCACAAAGAAAATAACTTCGATTTTCGGACACAAAATCAATGGGTAGCTTTCTCAACAGAATCATCCTCCTTTAACAGAGTAGATGAGTGGGTGAAAGATCTTGAAAATCAGCAGCCACCATCTGAAGATGATTTTGCTGATGAAAGTACTGAAACCATTGTCTTGCCACCTTCTCCGGATGCTGATAGATCAATGGCAAGAAGTACGACTCAGTTGCCTCAAAATCCAGATGCCGACAATCTTTCAAAGGATACTTTGTATGCCAATAGCATGGTGCAATCTCTGAATCCAGCCTCAACTGCAGCTCATATATCTGGCATTGGTATAAAAGTCATCCCTGCAATTACACACTTCTCCAGTCTTCGTTCCGTGAATTTGTCAAACAATTTCATAGTTCACATCACACCTGGATTTCTCCCAAAGGGTCTTCATACGCTTAATTTGTCAAGAAACAAGATCAGCACAGTTGAGGGCCTCCGAGAATTAACCCGATTGCGGGTACTTGACCTAAGTTATAATCGCATCTCAAGAATTGGACAAGGGCTATCAAATTGTACACTGGTCAAAGAGCTATATCTTGCGGGAAACAAGATAAGCGATGTTGAGGGCCTACATAGGTTATTCAAGATAACAGTTCTGGACTTGAGCTTTAATAAGATCACAACCACAAAAGCATTACGCCAGCTTGTAGCCAACTACAACTCAGTTCAGGCCCTGAATCTGCTCGGAAATCCAATTCAAAGCAACATCAGTGATGAGCAGCTGCGCAAAGCAGTTTGTGATCTTCTTCCCAAGCTGGTGTACCTGAACAAGCAATCCATCAAGCCTCAAAGGGCACGAGAGATGCTCACTGATAGTGTTGCCAAAGCTGCACTTGGAAACAACAGCCGGACGCCCAACAGAAGAGCACTGAAGAAAGGTGTCCAAGGAGGATCAAGTTCCTCCGGTGTGCATAGAAGCAGTGCTAGTTTAGCCCAGAAAAGCAGGCAAAGGTCAAAGAGCCAAACTAAACATCATTAG 2016 0.4311 MDMCRCVSVLIGRKDKIKGIEGTSKGDLKKLHAKVQHPTISSKSRGIKPDDTHDVTTGGTQMNSRCNVKVTNLGSPMKTEVEEAYEGEDEHEDSPSIKRELSDFDLQVHEAVASKVGYDPTGKEIHSPGLYKKQTNIQLEDTDDKYDKNSVDLIQSGHVSDPGMAKPDFWASPELKRSCSNLERRNIFRKTAHHFPSSKSHSFEDLQELTANQMVNLESPRSVMTQRSADRVMLKRRSSSQVLPSGSKKLWWKLFLWSHRNIHQPWVSKSTQLHTASAVFNSQCGYSSDILEPKQGKTLRHVGSPSHASSSGEYFSKSGKDKNIDKQRWSRFHKENNFDFRTQNQWVAFSTESSSFNRVDEWVKDLENQQPPSEDDFADESTETIVLPPSPDADRSMARSTTQLPQNPDADNLSKDTLYANSMVQSLNPASTAAHISGIGIKVIPAITHFSSLRSVNLSNNFIVHITPGFLPKGLHTLNLSRNKISTVEGLRELTRLRVLDLSYNRISRIGQGLSNCTLVKELYLAGNKISDVEGLHRLFKITVLDLSFNKITTTKALRQLVANYNSVQALNLLGNPIQSNISDEQLRKAVCDLLPKLVYLNKQSIKPQRAREMLTDSVAKAALGNNSRTPNRRALKKGVQGGSSSSGVHRSSASLAQKSRQRSKSQTKHH* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2516 671 Gene3D Ribonuclease Inhibitor 395 512 IPR032675 -
Mal2g2516 671 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 4 670 - -
Mal2g2516 671 Pfam Leucine rich repeat 452 507 IPR001611 GO:0005515
Mal2g2516 671 SMART LRR_typ_2 494 517 IPR003591 -
Mal2g2516 671 SMART LRR_typ_2 450 472 IPR003591 -
Mal2g2516 671 MobiDBLite consensus disorder prediction 368 412 - -
Mal2g2516 671 MobiDBLite consensus disorder prediction 297 320 - -
Mal2g2516 671 MobiDBLite consensus disorder prediction 624 662 - -
Mal2g2516 671 MobiDBLite consensus disorder prediction 395 412 - -
Mal2g2516 671 SUPERFAMILY Outer arm dynein light chain 1 442 608 - -
Mal2g2516 671 SMART LRR_sd22_2 494 516 - -
Mal2g2516 671 SMART LRR_sd22_2 539 560 - -
Mal2g2516 671 SMART LRR_sd22_2 517 538 - -
Mal2g2516 671 SMART LRR_sd22_2 472 493 - -
Mal2g2516 671 ProSiteProfiles Leucine-rich repeat profile. 519 540 IPR001611 GO:0005515
Mal2g2516 671 Gene3D Ribonuclease Inhibitor 513 612 IPR032675 -
Mal2g2516 671 MobiDBLite consensus disorder prediction 37 62 - -
Mal2g2516 671 MobiDBLite consensus disorder prediction 624 671 - -
Mal2g2516 671 PANTHER NISCHARIN RELATED 4 670 - -
Mal2g2516 671 ProSiteProfiles Leucine-rich repeat profile. 474 495 IPR001611 GO:0005515
Mal2g2516 671 MobiDBLite consensus disorder prediction 302 317 - -
Mal2g2516 671 ProSiteProfiles Leucine-rich repeat profile. 496 518 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2516 Mal-Chr2 31878395 31880689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2516 - - cam:101493323 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2516 2 31878395 31880689 Mal2g2516 2 31878395 31880689 ECH
Mal8g2435 8 53963172 53965178 Mal2g2516 2 31878395 31880689 PCT