Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1802 ATGCCGACGCCGGTAAGCTCCGCTCGGCAATTCCTAACCGACGAAGCGGCGCGTGCTCTCGACGACGCAGTAACCGTCGCACGCCGTCGCAGCCACGCACAAACAACCTCCCTCCACACCATCTCCGCCTTACTCTCCCTCCCATCTTCATCCCTCCGCGATGCCATCTGCCGAGCACGAACCTCCGTCCGATTCACCTCCCACCCCACGTTCTCACACCGTCTCCACCTCCGTGCACTCGAGCTCTCCGTCGGCGTATCCCTCGACCGCCTCCCGTCGTCAAAACCGTCTCCGGTAGAAGAACCGCCGGTTTCGAATTCTCTCATGGCGGCGATCAAACGGTCGCAGGCGAATCAACGCCGGTCGCCGGAGAGTTTTCATTTCTATAACCAAAACGGAACGGCGTCGTCTTTGTTGAAAGTTGAACTGAAACACTTCGTTTTATCGATTCTTGATGATCCAATAGTGAACCGTGTTTTTTCTGAAGCTGGTTTTCGAAGCTGTGATGTTAAACTCGCTTTGCTTCAACCACCGGTTCAGCTTCAATCCACTTCCCGGGTTTTTTCTCCACCGGTTTTTCTTTGTAATCTTGACCCGGTTCGAACCGGTGTAACTACTTTTCCTTTACCTTTACGCGTTGATGAGAATTCAAGAAGAATCGCTGAGGTTATTGCGGTGAAAGAGAAAAAAATGAATCCTTTGTTGATGGGTTTTTATGCAAAAGATGCTTTTAAGAATTTTGTTGAGTTGTTACAAAAGGGTTTAGGTGGTGGTTTGTTTCCACCTGGGATGTCTGGTTTGAGTGTTGTGTGTGTTGAAAAGGACATTGTTGAGTTTGTTAAGGATGGTGGGAGTGAGGAGAAGATGGGGTTGAGGTTTAAGGAATTAGGGTGTGAGGTTGAGAAGTGTTTGGGTGTTGGTGTTGTTGTTGGTTTTGGAGAGATTGAGGTTTTGGTTGGGGATGATGTGGATGGTGGGGGTGTTAGGTTTGTTGTTTCCGAGTTGACGAGGTTGTTGGAGGTTTATGGTGAGAAGGTTTGGTTGATGGGTGTGGCTGAAACGTCGGAGGTTTATTCGAAGTTTTTGAAATTGTTTCCGGGTGTGGATAAGGATTGGGATTTGCATTTGCTTACTATGACATCTGCTAGTCCTTTAATGGAAGGACTATACTCTAAATCCAGTTTGATGGGGTCCTTTGTTCCATTTGGTGGATTCTTTTCTACACCTCCTGAAAGCAAAAGTCCCATTAGCCCTACAAATGCATCATTTACTCGTTGCGACAAATGCAATGAAAAATATGAACAAGAAGTTGCTGATGTTTTGAAGGTAGATCCTGCTACTCTGGCATCAAATCACTCAACAAGCTTGCCTTGGTTTAAGAAGGCTGTTGATGTGGATACACACGGAGGACTTGATGTGGCAAAGACTTATGAAGAAAATACAAGCTTGAATGATAAGATATTGGGATTTCAAAAGAAATGGAATGATATTTGTCAACGTCTCCATCAAACAAGGTCTCAAGTTCCATCACATGAGGTTTTACGGTTTGGTTCTGGTTTTAACGAAAGCAGCAGTAAAGATCCATCACTTAATGAACTCCAATGTTCTAGTCCATTTTCCTTCGTGCCTAAAGAGTTGCATGGTACTTGTCCATCAAAACAGTTATCACCTACTCCAGTACATACTGATACAGTTAGTGTCAATGTTCGAACTGATCATGTGCCGAAAGTTACAGAGACTCAGCAAAATGACATAACGACTCCTTGGCTCGCCCCTTCACGTATGACCAATATGAGAGTGCTGGACAACAAATCATCTTCATTCCTTATTCCTGTGACCACAGATTTAGGATTGGGAACGTTGTATACATCAACATCAATTGCTCGCAAGCCAGATACTCCAGAATTTCAAGGTAAAAGAAAGCATTTTGAGCACTTTTCAGACGCTACTTCAGCTGATTCTGTTGCTGTCAATGGAAATACATCACACCAGATTGCTAGATCTCACTGCCCTGCTTCAAACTTGGCGTCAAAATATGAATCAGTAGATTTCAAGTCTCTTAATAAACTTCTCTTTGAAAAGGTTGGTTGGCAGAATCAGGCCATATGTGATATCAATCGAACTCTGTTCCTTCATAAATCCGGCGAAGGGAAGAGCAGAGACTCGCATGGTAGAGTAGACATATGGTTTGCTTTCCTAGGACCAGATAGAATTGCAAAAAAGAAAATTGCTTCGGCACTTGCAGAGACTATATATGGAAATACAGAAAGCATCATCTCTTTGGATCTTGGCTTCCAGGACAGGCTTTACCCATCTAACTCGATTTTCGAATGCCAAAAGTCATTTTGTTATGATGTGTTTATAAGGAAAACAGTTGTGGACTATATTGCTGGGGAGTTGAGTAAAAATCCCCATTCCGTTGTCTTTCTTGAAGATGTAGATAAAGCTGATTTTCTGGTGCAGAGTAGTTTGTTGCAGGCAATAAGAAGAGGTAAATTTCCAGACTCACGTGGAAGGGAAATAAGCATCAACAACGCAATCTTTCTTTTAACCTCGACTGGCAACGGCTCTTCTGCTTCGGAGGAAGGTAAATTGTTTTCGGAAGAAACAATCCTTGAAGCCAAAAGATCTCAAATGCAATTACTACTTGGAGATACATCTGAGGATGCCAAAAGAAGCTTTAGTACAAATGTCAAGATTGTGCAGAGAAAAGGGTTTTCCAAACCATCATTTATGAATAAAAGAAAACAAGCTGATACTCATGACTTCAAAGAGGGAGCAGCAAGCAAGATGCAAAAACAGGTTTGCGGGACATCGATGTCCTGTCTGGATTTAAATATGCCTCTAGAAGAGGGTATGGATGATAACGACCATGAATGCGAGTCTGTATTGGAAAACTCAGACTCCTGGTTTAGCGATTTCTGCAACCAAATGGATGAGAAAGTGGTTTTCAAGCCATTCAATTTCGATGCGCTTGCTGAACAATTACTTAAAAGCATTAGCATACAATTTGAAAAGACATTTGGTTCAGAGTATCAGTTAGAAATTGATTATGAGGTAATGGCACAGATACTTGCAGCTGCTTGGTTAGCAGAGAAGAAAAATGCAGTGGATGATTGGGTTGAAAATGTTCTTGGCAAAGGCTTCATTGAAGCTCAACATAAATTCCACACTGCAACTATGTATGTTGTGAAACTAGTTAACTGTGAATCTATTTTTGTGGAAGAACCTGATCTTGGAGTGTGCCTTCCAGCTAGCATTAACATGAAGTAA 3273 0.4284 MPTPVSSARQFLTDEAARALDDAVTVARRRSHAQTTSLHTISALLSLPSSSLRDAICRARTSVRFTSHPTFSHRLHLRALELSVGVSLDRLPSSKPSPVEEPPVSNSLMAAIKRSQANQRRSPESFHFYNQNGTASSLLKVELKHFVLSILDDPIVNRVFSEAGFRSCDVKLALLQPPVQLQSTSRVFSPPVFLCNLDPVRTGVTTFPLPLRVDENSRRIAEVIAVKEKKMNPLLMGFYAKDAFKNFVELLQKGLGGGLFPPGMSGLSVVCVEKDIVEFVKDGGSEEKMGLRFKELGCEVEKCLGVGVVVGFGEIEVLVGDDVDGGGVRFVVSELTRLLEVYGEKVWLMGVAETSEVYSKFLKLFPGVDKDWDLHLLTMTSASPLMEGLYSKSSLMGSFVPFGGFFSTPPESKSPISPTNASFTRCDKCNEKYEQEVADVLKVDPATLASNHSTSLPWFKKAVDVDTHGGLDVAKTYEENTSLNDKILGFQKKWNDICQRLHQTRSQVPSHEVLRFGSGFNESSSKDPSLNELQCSSPFSFVPKELHGTCPSKQLSPTPVHTDTVSVNVRTDHVPKVTETQQNDITTPWLAPSRMTNMRVLDNKSSSFLIPVTTDLGLGTLYTSTSIARKPDTPEFQGKRKHFEHFSDATSADSVAVNGNTSHQIARSHCPASNLASKYESVDFKSLNKLLFEKVGWQNQAICDINRTLFLHKSGEGKSRDSHGRVDIWFAFLGPDRIAKKKIASALAETIYGNTESIISLDLGFQDRLYPSNSIFECQKSFCYDVFIRKTVVDYIAGELSKNPHSVVFLEDVDKADFLVQSSLLQAIRRGKFPDSRGREISINNAIFLLTSTGNGSSASEEGKLFSEETILEAKRSQMQLLLGDTSEDAKRSFSTNVKIVQRKGFSKPSFMNKRKQADTHDFKEGAASKMQKQVCGTSMSCLDLNMPLEEGMDDNDHECESVLENSDSWFSDFCNQMDEKVVFKPFNFDALAEQLLKSISIQFEKTFGSEYQLEIDYEVMAQILAAAWLAEKKNAVDDWVENVLGKGFIEAQHKFHTATMYVVKLVNCESIFVEEPDLGVCLPASINMK* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1802 1090 Gene3D - 10 177 IPR036628 -
Mal8g1802 1090 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1089 - -
Mal8g1802 1090 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1089 - -
Mal8g1802 1090 Gene3D - 661 986 IPR027417 -
Mal8g1802 1090 SUPERFAMILY Double Clp-N motif 12 125 IPR036628 -
Mal8g1802 1090 ProSiteProfiles Clp repeat (R) domain profile. 8 184 IPR004176 -
Mal8g1802 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 677 1028 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1802 Mal-Chr8 36516066 36521198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1802 - - gmx:100804458 1328.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1802 8 36516066 36521198 Mal8g1802 8 36516066 36521198 ECH
Mal8g1802 8 36516066 36521198 Mal2g2710 2 35249691 35253780 ECH
Mal8g1802 8 36516066 36521198 Mal2g3286 2 49043000 49048705 ECH
Mal2g3286 2 49043000 49048705 Mal8g1802 8 36516066 36521198 PCT