Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3286 ATGCCGACGCCGGTAAGCACAGCGCGACAATGTTTAACTGATGAAACAGCGCGTGCACTCGACGACGCAGTCTCCGTAGCGCGTAGACGAAGCCACCCTCAAACAACTTCCCTCCACGCCATCTCCGCCTTACTCTCTCTCCCCTCCAACGCTCTACGCGCCGCCTGCTCATTCTCACGCGCCTCCACCTCCCCTTACTCCCCTCGCCTCCACTTTCGCGCCTTAGAACTCTCCGTCGGTGTCTCCCTCGACCGCCTCCCCACCGCCAAAACCACCGCCGTCGTCGCCGGAGGCGACGACGGCGGCCCTCCGGTGTCAAACTCTCTCATGGCTGCCATTAAACGGTCTCAAGCAAACCAACGTCGTCATCCAGATAGCTTCCATTTGCTACAAATAATGCAGCAGCAACAGCAACAAAACCAGAATCAAACTGCGTCGTTTTTGAAAGTTGAGTTGAAGCATTTCATTCTTTCAATTCTTGATGATCCTATCGTGAGCAGAGTTTTTGCAGAAGCTGGTTTTCGTAGCTATGATGTTAAGTTTGCTTTACTTCAACCTCCACCACCACCACCTTCTAGATTTTTTCACCGTTCTTCTCCACCGGTTTTTTTATGTAATTTTGAACCGGACCGGTTTGAAACGGTTCGGTTCGATGAGAATTCGAGAAGGGTTGTTGAGGTTTTAGCTGGGAAGAGTTTGAGTGAGAGCAAGAGTAAGAGAAGGAATCCACTTTTGATGGGGGTTTATGCAAAAACCGCTTTAAAAAGGTTTATAGAGTTAGTTCAAAGTGGAAAAGTTGGTTTTTTACCTAATGAGCTTGATGGGTTAAGTGTGGTTTCTATTGAGAATGAGATTTTTGAGTTTGTTGTTGGAAATGGAAGTGAAGAGAAGATGGGGTTGAGATTTGATGAAGTGGGTCGTTTAGTTGAGCAATGTTTGGGTGCTGGTGTTGTTGTTAGTTTTGGGGTGATTGAGGTTTTTGTGAAGAATGATGATGTTGGTGATGATGTTGTGTTTGTTGTTTCAAGGTTGAAGAGGTTGTTGGAGGTTTATGGTGGGAAGGTTTGGTTGGTTGGTGTAGCAGGAAATTGTGATGTGTATTCTAAGTTTTTGAGGTTGTTCCCTAATGTTGATAAGGATTTGGATTTTCATGTTTTGACTGTGACATCTGCTACTCCTTCTATGGAAGGACTATACTCTAAATCCAGCTTGATGGGGTCCTTTGTTCCATTTGGTGGCTTCTTTTCCACACCTTCTGATTTCAGAAATCCCAATGCACCATCATCTTTAACTCTTTGTGACACATGCAATAAAAAGTATGAACAAGAAGTTGCTGATAATTATGTGAATGTAGGGCCTTCTACTTCAGCATCAACAAGTTTACCTTGGTTACAAAAGTTGAATGTGGATTCAGATAGAGGATTGGGTTTGGCAAAGACCAATGAAGATAACACAAGTTTGAATGCTAAGATCTTCGGATTGCAGAGGAAATGGAGTGATATCTGTCAACATCTTCATCAAAACAAATCATTTGCTGAAATCAATTTTTCCCAAACATTAACAGGGTTCCAAGCTCCATTCCACGAGGGGTTTCGATTCGGTAGAGGAACTAGCAACCTTAATGAAATCCACTGTTCTAATCCAATTCCCTACATGTCTAAAGAGTTACAAACTCCATTTCCATCCAAACAGATATTACCATTTTCACAACCTTTGGATACTACTCTTAGTGCCAAAGATAAATCTGAACATGTGCCGAAAGTTTCAAAATTCGACATACAGAATCCTATCCTTAACCACAAGTCATCTTCATCCGTTAATCCTGTCACCACAGATTTGGTTTTGGGAACGACATATACATCGGTTACTCATGAGCCAGATACCCCGAAATTAAGTGATCATAAGAAGCATCTTCAGCACTTGTCGGAATCTCTTTCGACTGATTTTGATGCTATGAATGAGAGTACTTCAAACCAAATTGCTAGATCCTCTTCCTACTCTGGTTCAAATTTGGAAGGCAAATTTGAATCGGTTGATTTCAAGTCACTTTACAAACTTCTTATTGAAAAGGTTTGGTGGCAAGATGAAGCAATATATGCCATCATTAGAATTATGACACTTTGTAGATCTGGTGCCGAAAAGCATAGTCGATCAAGTTTGAATGTTAGAGCCGATACATGGTTTTCTTTCCTTGGACCAGATAGAGTTGGAAAAAGAAAAATTGCTTCAGCACTTGCAGAAACTCTATTTGGAAGCAATCAATGCCTAATCTCAGTGGATTTAAGCTCACAGGATAGGTTTCAACCATTGAACTCGATTTTCGAATGTCACGATGTGTTTAGGAGGAAGACCGTTGTGGATTATATTGCTGGCGAGTTGAGTAAAAAGCCGCATTCGGTTGTGTTTCTTGAAAATATTGATAAAGCTGATTTGATAGTGCAGAATAGTTTGTTCCAAGCAATAAGAACAGGTAAATTTCCATACTCACATGGAAGGGAAATCAGCATCAACAATGCAATCTTTGTTGTGACCTCTTCTGTGTTCAAAGTTGGCGGCTTTTTCGATATGGAAAAGGAACCAAAAATATTTCCTGAGGAAAGAATCCTTGAAGCAAAAAGATGTCAAATTGAATTATCACTTGGACATGCTTCCGAGGATGTCATGAGAAGCGGTTGCAAAAATGTGAGGGTTGCAAAGAGAAAAGGAACATTTCTGAATAAAAGAAAGCTAGGTGAAACTGAAAGCAGTGATTCCAATGAGAAATTAACTAGCAAGTCAATGAAACATGTCAGAGAGGGGTCACGGTCGTATCTGGATTTGAATATGCCTCTAGAAGAGGAAGTGGAAGATGATGAGTGTGAAAGTGAATCTGTAGTTCAAAATCACGAAGCATGGTTAAATGATTTCCTTGAACAAATTGATGGAAAAGTGGTTTTTAAGCCATTTAATTTTGATTTACTGGCTGAGCAAGTAATCGAATGCATAGACAAACAATTTCAAAGACTATTTGGATCAAATTTTGTGCTGGAAATTGATTATGAGGTCATGTCAGAGATACTTGCAGCTGCTTGGTTATCAGACAAGAAAAAAGCAGTAGATGATTGGATTGAACATGTTCTTGGAAGTAGCTTTGTTGAGGCACAAAAAAAGTATCAAAATGTAGCTGAGTATGTCATGAAATTGATTAAATGTGAAAGCATTTTTGTGGAAGAGCAAACTACAGGAGTATGCCTTCCAGCTAGAATTAGCTTGAACTGA 3258 0.4079 MPTPVSTARQCLTDETARALDDAVSVARRRSHPQTTSLHAISALLSLPSNALRAACSFSRASTSPYSPRLHFRALELSVGVSLDRLPTAKTTAVVAGGDDGGPPVSNSLMAAIKRSQANQRRHPDSFHLLQIMQQQQQQNQNQTASFLKVELKHFILSILDDPIVSRVFAEAGFRSYDVKFALLQPPPPPPSRFFHRSSPPVFLCNFEPDRFETVRFDENSRRVVEVLAGKSLSESKSKRRNPLLMGVYAKTALKRFIELVQSGKVGFLPNELDGLSVVSIENEIFEFVVGNGSEEKMGLRFDEVGRLVEQCLGAGVVVSFGVIEVFVKNDDVGDDVVFVVSRLKRLLEVYGGKVWLVGVAGNCDVYSKFLRLFPNVDKDLDFHVLTVTSATPSMEGLYSKSSLMGSFVPFGGFFSTPSDFRNPNAPSSLTLCDTCNKKYEQEVADNYVNVGPSTSASTSLPWLQKLNVDSDRGLGLAKTNEDNTSLNAKIFGLQRKWSDICQHLHQNKSFAEINFSQTLTGFQAPFHEGFRFGRGTSNLNEIHCSNPIPYMSKELQTPFPSKQILPFSQPLDTTLSAKDKSEHVPKVSKFDIQNPILNHKSSSSVNPVTTDLVLGTTYTSVTHEPDTPKLSDHKKHLQHLSESLSTDFDAMNESTSNQIARSSSYSGSNLEGKFESVDFKSLYKLLIEKVWWQDEAIYAIIRIMTLCRSGAEKHSRSSLNVRADTWFSFLGPDRVGKRKIASALAETLFGSNQCLISVDLSSQDRFQPLNSIFECHDVFRRKTVVDYIAGELSKKPHSVVFLENIDKADLIVQNSLFQAIRTGKFPYSHGREISINNAIFVVTSSVFKVGGFFDMEKEPKIFPEERILEAKRCQIELSLGHASEDVMRSGCKNVRVAKRKGTFLNKRKLGETESSDSNEKLTSKSMKHVREGSRSYLDLNMPLEEEVEDDECESESVVQNHEAWLNDFLEQIDGKVVFKPFNFDLLAEQVIECIDKQFQRLFGSNFVLEIDYEVMSEILAAAWLSDKKKAVDDWIEHVLGSSFVEAQKKYQNVAEYVMKLIKCESIFVEEQTTGVCLPARISLN* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3286 1085 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 802 820 IPR001270 GO:0005524
Mal2g3286 1085 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 728 746 IPR001270 GO:0005524
Mal2g3286 1085 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 835 849 IPR001270 GO:0005524
Mal2g3286 1085 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 675 847 IPR027417 -
Mal2g3286 1085 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1085 - -
Mal2g3286 1085 ProSiteProfiles Clp repeat (R) domain profile. 8 189 IPR004176 -
Mal2g3286 1085 Pfam AAA domain (Cdc48 subfamily) 728 847 IPR003959 GO:0005524|GO:0016887
Mal2g3286 1085 Gene3D - 10 185 IPR036628 -
Mal2g3286 1085 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1085 - -
Mal2g3286 1085 Gene3D - 653 981 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3286 Mal-Chr2 49043000 49048705 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3286 - - gmx:100776148 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3286 2 49043000 49048705 Mal2g3286 2 49043000 49048705 ECH
Mal2g3286 2 49043000 49048705 Mal2g2710 2 35249691 35253780 ECH
Mal8g1802 8 36516066 36521198 Mal2g3286 2 49043000 49048705 ECH
Mal2g3286 2 49043000 49048705 Mal8g1802 8 36516066 36521198 PCT