Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4720 ATGCTGAGCTCTGATGATGATGATGGAGATATTGATGTATTCTATGACTCATTGGATAGTTTGTCAGGTGAAGATTCTATTTTAGCTAAAGAAGAGTTTGGTTCTGTAAGGAGAGTTTGTTTTGATTATGATGAAATTTGGGTGAATGAGCCTATTAGTGTGAAGGAAAGAAGGGAACGTTTTCTGCAGTGTATGGATTTAGCTTATAGCTCTTCCAAGGTTTGCTCACAGGAGAAAATTATGAGGCTTAATGAGAGAATCAGGGTGTGCAGTGGAGCAGTCTCAAATGCATGCATTTCTCCTTCTGATGAAGTATCTGAGAAGTTGGTTCTCTCTGGATGGAATGCTGCTTCTGAAGCAGAAGTCTTGTTACAAGAATTGAAAGTGCGTCGTGAGGATGAAGTGGATGCAAGTTTTCAAGAGCACAGACAAAGAGAAGGTGCGGCACAAGAAGAATTTAAGAATTTTGATAAGGGTAAAACTAATGGGAAAAACTGGTGGAAGCGATTTGCAAACATAAGGAAAGGCGACGAAGGAAAAGTTAGATCAAAATTGAGTACAGTGACAAATAAAACTCGTAGAGTAAAGGTAAGACAGAATAAAAAGAGGTGGATGGAGTTTAGTGAGGTATACATTGGACAAGAGATTAAAGCTCACAAAGGACTGATATGGACTATGAAATTCAGTCCTAATGGTGAGTATTTAGCTAGTGGAGGTGAAGATGGTGTTGTGCGCATATGGCGCATTATGTCACGGAACAAAAACAAGCCTTTCATTTTCCTTCCAAATGGTGTTTTTCAAATTGAGGAGTCACCACTGCAAGAATTGTTTGGACATTCCAGTGATATCTTGGATTTGGCTTGGTCTAATTCAGATAATCTTATCTCGTCTTCTACGGATAAAACTGTTCGCTCTTGGAAAATCGGTTGTGATCAATGTCAAAGTGTTTTCCCTCACAAAGACTTTGTAACGTGCATTCAGTTCAACCCTGTTGATGAAAATTACTTCATCAGTGGATCGATAGATGGTAAAGTTCGAATATGGGGGATACGTGAAGAGCGAGTTATTGACTGGGCCGATATACGGGATGTCATAAGTGCTATAAGTTACCAACAAGATGGGAATGGATTTGTAGTTGGTTCTGTTACAGGCATGTGCCGATTTTATGTTGTTTCAGGAAAATATTTCCAGCTTGAGGCGCAGATAGATATCCGTGGAAAGAAGAAAGGATCAGGCAACAAGATTACTGGCATTCAGTTTTTCCAAAACAACTGTCAGAGAATTATGATCACATCAGAAGATTCCAAAATTCGCATATTGGATGGAATTGAGATTGTTCACAAATACAAAGGCCTTCCGTGGTCAGGGAGTCAGATGTCTGGTTCATTTACATCAAGTGGGAAACATATAATTTCAGTTGGCGAGGATTCACGCGTGTATATTTGGAACTTCAATGACTTCAAAAGTGGTTCTTCGAAAAAAACGAAATCCGAGTGTTCTTGTGAGTATTTTTCCTTCAAGGGTCTAACAGTAGCAATACCTTGGTCAGGAATGAAAGCAGACAGAAGTGGCTGTAGAAATAACTTTTCTCACCATTCTTTGGAAGCAAAAACAAAGTTAGAGATTGCTTCTGAGGTTAGAGATGCAGAACGTTTTTCTCTCGGTAATTGGTTCTTCATCGATGGTACATGCCGAGGTTCAACTTCTATGACATGGCCTGAGGAAAAACTTCCAAAATGGGATTTACCTCTTGTAGAAGATGAATATGATCGTCAGAAGTTATGTCACGAAGATAGTAGCCACGACAGGAATATATCAGAAACATGGGGTCTTACAATAGTGGCAGCTGGTAGTGATGGAACTATCAAGACATTCCACAACTTTGGTTTGCCTGTTAGGCTTTAG 1905 0.3953 MLSSDDDDGDIDVFYDSLDSLSGEDSILAKEEFGSVRRVCFDYDEIWVNEPISVKERRERFLQCMDLAYSSSKVCSQEKIMRLNERIRVCSGAVSNACISPSDEVSEKLVLSGWNAASEAEVLLQELKVRREDEVDASFQEHRQREGAAQEEFKNFDKGKTNGKNWWKRFANIRKGDEGKVRSKLSTVTNKTRRVKVRQNKKRWMEFSEVYIGQEIKAHKGLIWTMKFSPNGEYLASGGEDGVVRIWRIMSRNKNKPFIFLPNGVFQIEESPLQELFGHSSDILDLAWSNSDNLISSSTDKTVRSWKIGCDQCQSVFPHKDFVTCIQFNPVDENYFISGSIDGKVRIWGIREERVIDWADIRDVISAISYQQDGNGFVVGSVTGMCRFYVVSGKYFQLEAQIDIRGKKKGSGNKITGIQFFQNNCQRIMITSEDSKIRILDGIEIVHKYKGLPWSGSQMSGSFTSSGKHIISVGEDSRVYIWNFNDFKSGSSKKTKSECSCEYFSFKGLTVAIPWSGMKADRSGCRNNFSHHSLEAKTKLEIASEVRDAERFSLGNWFFIDGTCRGSTSMTWPEEKLPKWDLPLVEDEYDRQKLCHEDSSHDRNISETWGLTIVAAGSDGTIKTFHNFGLPVRL* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4720 634 ProSiteProfiles Trp-Asp (WD) repeats profile. 216 257 IPR001680 GO:0005515
Mal7g4720 634 PANTHER WD REPEAT DOMAIN 44 252 634 IPR040324 -
Mal7g4720 634 PANTHER WD REPEAT DOMAIN 44 8 255 IPR040324 -
Mal7g4720 634 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 308 IPR001680 GO:0005515
Mal7g4720 634 SUPERFAMILY WD40 repeat-like 212 623 IPR036322 GO:0005515
Mal7g4720 634 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 8 255 - -
Mal7g4720 634 SMART WD40_4 351 390 IPR001680 GO:0005515
Mal7g4720 634 SMART WD40_4 442 483 IPR001680 GO:0005515
Mal7g4720 634 SMART WD40_4 269 307 IPR001680 GO:0005515
Mal7g4720 634 SMART WD40_4 310 349 IPR001680 GO:0005515
Mal7g4720 634 SMART WD40_4 209 248 IPR001680 GO:0005515
Mal7g4720 634 SMART WD40_4 401 441 IPR001680 GO:0005515
Mal7g4720 634 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 308 - -
Mal7g4720 634 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 216 249 - -
Mal7g4720 634 Pfam WD domain, G-beta repeat 271 307 IPR001680 GO:0005515
Mal7g4720 634 Pfam WD domain, G-beta repeat 312 348 IPR001680 GO:0005515
Mal7g4720 634 Pfam WD domain, G-beta repeat 215 247 IPR001680 GO:0005515
Mal7g4720 634 ProSiteProfiles Trp-Asp (WD) repeats profile. 316 358 IPR001680 GO:0005515
Mal7g4720 634 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 252 634 - -
Mal7g4720 634 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 227 247 IPR000009 GO:0000159|GO:0019888
Mal7g4720 634 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 283 311 IPR000009 GO:0000159|GO:0019888
Mal7g4720 634 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 418 446 IPR000009 GO:0000159|GO:0019888
Mal7g4720 634 Gene3D - 200 509 IPR015943 GO:0005515
Mal7g4720 634 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 316 351 - -
Mal7g4720 634 PRINTS G protein beta WD-40 repeat signature 235 249 IPR020472 -
Mal7g4720 634 PRINTS G protein beta WD-40 repeat signature 294 308 IPR020472 -
Mal7g4720 634 PRINTS G protein beta WD-40 repeat signature 336 350 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4720 Mal-Chr7 115474825 115477575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4720 205 397 Miscellaneous Gene Families AT5G08390 23.737 8.24e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4720 K20241 - gmx:100819135 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4720 7 115474825 115477575 Mal7g4720 7 115474825 115477575 ECH
Mal7g4720 7 115474825 115477575 Mal2g1531 2 18359049 18362185 PCT