Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1531 ATGCTGATGATCTCTGATGAAGGAGATAATGATGTGTTCTTTGACTCATTGGAATGTTTGTCACCTCCTCAAGATTCTATTTTGACTAAACAAGACTTTGGGTATGAGTTTTGGCTTAATGAGCCAATTAGTGTGAAGGAAAGAAAGGGAAATTTTCTACAAGAGATGGGTTTTGTTGATGCTCCTTCTTCCAAGTTTTGTTCTCAAAATGAAATAGTGTGTTTTGAGGAAAGGATCATGGATTGCAGTGGAGCAGTATCAAATGGTTGTATTTTGGCTGATGCTGCTGAACAAGTTTCCGAGAAGTTGGTTGATCCCAAAGATGATGATGATGATGATGAAGAGCTATCATGTTCCAGTCAAGAGCTGAGACATAGAGAAGCTGAGACACTAGAAGAATCTCATGTTATTGATAATGGTAAAAAGAAGAAGAAAAAGTGGTGGAATCAAGTTCTCAACAGAGGGAAAGTTAGATCAAAATCTGGTAATGCGGGTAAGAGTAAAACTCTTCAAATCAATGTAAAGCACAATAAGAAAAGTTGGAATGAGCTTAGTGCTGTTTATACTGGACAAGAGATTAGAGCACACAAAGGGCTAATTTGGACTATGAAATTTAGTCCTAATGGTCAGTATCTAGCTACTGGAGGTGAAGATGGTGTTGTTCGTATATGGTGTGTTTCATCGTTGAAGGCTTCAAGTATTTGTTTTGTTAAAGAAGACAGCGACATTAGTAAATTGAAACATGACATGTCTTTTTCTCCGAAGAAATGCTCGAGTCGAACCCCCGCTGTTCTTCCAAGGAAGATTCTCAAAATTGAGGAATCCCCGGTGCAAGAACTATATGGTCATTCCAGTGATGTGATGGACTTGGCTTGGTCTGATTCTGATATGCTCCTTTCGTCGTCTATGGATAAAACAGTTCGCATGTGGAAAATTGGTTGTAATCAATGTTTAAAAGTTTTCCATCACAAGGATTATGTGACATGCATTCAATTCAACCCGGTTGATGAAAATTACTTCATCAGTGGCTCCATAGATGGCAAAGTCCGAATATGGGGAGTACATGAAGAGCGAGTTGTTGACTGGGCCGATGTACAAGATATCATAAGTGCCGTAAGTTACCAGCCAGATGGGAAGGGGTTTGTAGTTGGTTCCCTTTCTGGTACTTGCTGCTTTTATGTTGCTTCAGGTAAACAATCCCAGCTTGAGGCGAAGATTCGTGTCAATGAAAAAAAGAGATCATCTGGCAACAAGATAACTGGCATTCAGTTTTCCCAGAAAAACCATCAGAGAGTTATGGTCACATCACAAGATTCCAAAGTTAGAATATTGGAAGGCCGTGAACTCGTTCAGACATATAAAGGCCTTCCAATGTCGGGAAGTCAGATGTCTGGTTCATTTACATCAAGTGGAAAACACATAATTTCAGTCGGAGAGGACTCTCATGTATATATTTGGAACTTCAATGACTCCAGAGGTTATTTTTCCAAACAGAGAAAAACCGAGAGTTCTTGCGAGTACTTTCGCTCCAAGGGGGTCACCGTCGCAGTACCTTGGTCAGGCATGACTGCAGGAAGAAGCTGCTCTCTCAGCGATTGTGCCAACTATTCTTCCGAAACGCAACGCCAATGCGTTAGAGAGTCTGAACGTTTTTCTATTGGTAGTTGGTTCTCCATTGATGGTTCGTGCCGAGGTTCTATGACATGGCCTGAAGAGAAACTTCCCAGTTGGGATTCACCTCTTTCAGAAATTGAATCTGATGATGAAGAGCTATGTCTCAAAGATCTATGCCATGACAATTGTGTACCAGAAACATGGGGACTATCAGTTGTTGCAGCTGGTCTTGATGGAACCATCAAGACATTTCACAACTTTGGATTTCCTGTTAGGCTTTAA 1896 0.4072 MLMISDEGDNDVFFDSLECLSPPQDSILTKQDFGYEFWLNEPISVKERKGNFLQEMGFVDAPSSKFCSQNEIVCFEERIMDCSGAVSNGCILADAAEQVSEKLVDPKDDDDDDEELSCSSQELRHREAETLEESHVIDNGKKKKKKWWNQVLNRGKVRSKSGNAGKSKTLQINVKHNKKSWNELSAVYTGQEIRAHKGLIWTMKFSPNGQYLATGGEDGVVRIWCVSSLKASSICFVKEDSDISKLKHDMSFSPKKCSSRTPAVLPRKILKIEESPVQELYGHSSDVMDLAWSDSDMLLSSSMDKTVRMWKIGCNQCLKVFHHKDYVTCIQFNPVDENYFISGSIDGKVRIWGVHEERVVDWADVQDIISAVSYQPDGKGFVVGSLSGTCCFYVASGKQSQLEAKIRVNEKKRSSGNKITGIQFSQKNHQRVMVTSQDSKVRILEGRELVQTYKGLPMSGSQMSGSFTSSGKHIISVGEDSHVYIWNFNDSRGYFSKQRKTESSCEYFRSKGVTVAVPWSGMTAGRSCSLSDCANYSSETQRQCVRESERFSIGSWFSIDGSCRGSMTWPEEKLPSWDSPLSEIESDDEELCLKDLCHDNCVPETWGLSVVAAGLDGTIKTFHNFGFPVRL* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1531 631 PRINTS G protein beta WD-40 repeat signature 340 354 IPR020472 -
Mal2g1531 631 PRINTS G protein beta WD-40 repeat signature 298 312 IPR020472 -
Mal2g1531 631 PRINTS G protein beta WD-40 repeat signature 212 226 IPR020472 -
Mal2g1531 631 ProSiteProfiles Trp-Asp (WD) repeats profile. 320 362 IPR001680 GO:0005515
Mal2g1531 631 SMART WD40_4 355 394 IPR001680 GO:0005515
Mal2g1531 631 SMART WD40_4 399 445 IPR001680 GO:0005515
Mal2g1531 631 SMART WD40_4 446 487 IPR001680 GO:0005515
Mal2g1531 631 SMART WD40_4 273 311 IPR001680 GO:0005515
Mal2g1531 631 SMART WD40_4 186 225 IPR001680 GO:0005515
Mal2g1531 631 SMART WD40_4 314 353 IPR001680 GO:0005515
Mal2g1531 631 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 193 224 - -
Mal2g1531 631 ProSiteProfiles Trp-Asp (WD) repeats profile. 280 320 IPR001680 GO:0005515
Mal2g1531 631 Gene3D - 179 519 IPR015943 GO:0005515
Mal2g1531 631 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 280 312 - -
Mal2g1531 631 PANTHER WD REPEAT DOMAIN 44 5 631 IPR040324 -
Mal2g1531 631 ProSiteProfiles Trp-Asp (WD) repeats profile. 193 234 IPR001680 GO:0005515
Mal2g1531 631 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 320 352 - -
Mal2g1531 631 Pfam WD domain, G-beta repeat 275 311 IPR001680 GO:0005515
Mal2g1531 631 Pfam WD domain, G-beta repeat 192 224 IPR001680 GO:0005515
Mal2g1531 631 Pfam WD domain, G-beta repeat 316 352 IPR001680 GO:0005515
Mal2g1531 631 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 5 631 - -
Mal2g1531 631 SUPERFAMILY WD40 repeat-like 191 490 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1531 Mal-Chr2 18359049 18362185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1531 187 393 Miscellaneous Gene Families AT5G08390 23.113 1.07e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1531 K20241 - gmx:100780979 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1531 2 18359049 18362185 Mal2g1531 2 18359049 18362185 ECH
Mal7g4720 7 115474825 115477575 Mal2g1531 2 18359049 18362185 PCT