Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2580 ATGTGTGACACTATGTCTGGACCTATTACTATTGATCGACCTGTTAAAGGTCTTGAGAATGAATATTTGGAGGATGAAAAGAAAACAAGGCTTGGATCCTTAAAGAAGGTAGCAATAAGTGCATCTTCTAAGTTCAAACATTCCTTGAAGAAGGGGCGAAGGCACAACAGGGTCATATCTATTATCGAGGATGAAATCGATACAGAAGAGTTGCAGGCAATTGACGCTTTTCGCCAAGCACTTATCCTAGAAGAGCTACTACCCTCAAAACATGATGATCATCATATGATGCTTAGGTTCTTGAGAGCAAGGAAGTTTGACATTGAAAAAACAAAGCAAATGTGGGCAGAGATGCTCCAATGGAGGAGGGAATTTGGTGCTGACACTATCATGGAGGATTTTGAATTCGAGGAGATAGATGAAGTTCTAAAATACTACCCTCAAGGAACACATGGAGTTGATAAGGATGGAAGACCTGTTTACATCGAAAGGTTGGGTTTGGTTGACTCAAACAAACTGATGCAAGTAACGACTATGGACCGATATCTCAAGTACCATGTAAGAGAGTTCGAGAAGACATTCAATGTTAAGATGCCTGCTTGTTCAATTGCAGCAAAGAAGCACATTGATCAAAGCACAACTATTTTGGATGTCCAAGGAGTGGGTTTCAAAAGTATGAATAAAGCTGCAAGAGATCTCCTCCAGAGGCTTCAGAAGATTGATGGTGACAACTACCCTGAGTCGCTGAACCGTATGTTTATTATCAATGCTGGTTCTGGATTTAGGATGTTGTGGAACACTGTTAAGTCCTTCCTTGATCCCAAGACCACCTCGAAAATCCACGTTCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATCGATGCCAGTGAACTTCCAGAGTTCTTGGGGGGTACTTGTACTTGTGCAGACAAAGGTGGTTGCATGCTTTCTGACAAAGGACCATGGAATGATCCAGAAATCTTGAAGATTGTTCAAAACGGTGAAGCAAAATGCCGAAGGAAAACTTTATCCGAAATTGAGGAGAAAACAATCATCGAAGACGAAGCAGTGTCTCAAAAGGATTGCGATTCTTTCAACAAAGAATATGTTCTCGAGGAGGCATGCCATGCTATAGCAGAAGTAGCAAAACAATGTAATGCATATCAGTTTGACACATTGGTCTCAATGAATGACAAACAAGTATCTTGGAAGGAATCAGTACAAAATGATCAAAAGGCACTTCCTAAAAATTGCTTTGGTAACAATGTATGCAAGACTTCTAATGGATTTAGAAATCCATTTTCTGGCAGAATCATGGCCATGGTTTTGGGAATCATAACGTTCATCCGCATGACACGGAGCATGCCAAGAAAAATGACTGCAATTGCATTGTATGGTAACTCAGTATATTATGATGGCAATACGGTGAAAGCAGCACCCTTCATTTCCGTTGAAGATCACATGGCTCTAATGAAGCGCATGACCGATTTAGAAGAGAAGGTGAATATTCTCAGCATGAGACCTTCCATGCCACCTGAAATGGAGGAATTGCTCAACAATGCTCTAAACCGTGTCGATACACTGGAGCAAGAATTGGCTACAACCAAGAAGGCACTTGATGATGCCCTTGCAAGGCAAGTGGAGCTTCAATCACAAATTGACAAAAAGAAAAAGAAGAAAAAATTGTTCCATTGGTAA 1704 0.4073 MCDTMSGPITIDRPVKGLENEYLEDEKKTRLGSLKKVAISASSKFKHSLKKGRRHNRVISIIEDEIDTEELQAIDAFRQALILEELLPSKHDDHHMMLRFLRARKFDIEKTKQMWAEMLQWRREFGADTIMEDFEFEEIDEVLKYYPQGTHGVDKDGRPVYIERLGLVDSNKLMQVTTMDRYLKYHVREFEKTFNVKMPACSIAAKKHIDQSTTILDVQGVGFKSMNKAARDLLQRLQKIDGDNYPESLNRMFIINAGSGFRMLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPEILKIVQNGEAKCRRKTLSEIEEKTIIEDEAVSQKDCDSFNKEYVLEEACHAIAEVAKQCNAYQFDTLVSMNDKQVSWKESVQNDQKALPKNCFGNNVCKTSNGFRNPFSGRIMAMVLGIITFIRMTRSMPRKMTAIALYGNSVYYDGNTVKAAPFISVEDHMALMKRMTDLEEKVNILSMRPSMPPEMEELLNNALNRVDTLEQELATTKKALDDALARQVELQSQIDKKKKKKKLFHW* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2580 567 SMART sec14_4 138 309 IPR001251 -
Mal7g2580 567 PRINTS Cellular retinaldehyde-binding protein signature 265 284 - -
Mal7g2580 567 PRINTS Cellular retinaldehyde-binding protein signature 298 307 - -
Mal7g2580 567 PRINTS Cellular retinaldehyde-binding protein signature 96 118 - -
Mal7g2580 567 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 8 565 - -
Mal7g2580 567 CDD SEC14 143 307 IPR001251 -
Mal7g2580 567 Gene3D - 53 125 - -
Mal7g2580 567 Gene3D - 126 338 IPR036865 -
Mal7g2580 567 Pfam CRAL/TRIO domain 144 306 IPR001251 -
Mal7g2580 567 Coils Coil 520 561 - -
Mal7g2580 567 SUPERFAMILY CRAL/TRIO N-terminal domain 64 134 IPR036273 -
Mal7g2580 567 Pfam CRAL/TRIO, N-terminal domain 90 116 IPR011074 -
Mal7g2580 567 SMART CRAL_TRIO_N_2 93 118 IPR011074 -
Mal7g2580 567 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 8 565 - -
Mal7g2580 567 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 138 312 IPR001251 -
Mal7g2580 567 SUPERFAMILY CRAL/TRIO domain 137 334 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2580 Mal-Chr7 87490023 87493465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2580 72 303 Acyl Lipid Metabolism Gene Families AT5G47730 28.631 6.08e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2580 - - gmx:100792335 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2580 7 87490023 87493465 Mal7g2580 7 87490023 87493465 ECH
Mal7g2580 7 87490023 87493465 Mal6g1090 6 16541743 16545406 ECH