Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2448 ATGAACAAGCCTCCACGAGAAGATCATGAGCGTAGCAACAACAACACTGTTACTACTCTTGACTCTAGATTCAGCCAGACGCTCCGAAATGTTCAAGGGTTACTCAAAGGTCGTAGCATGCCCGGTAAAGTATTAATGAGCAGAAGGTCAGAACCTTCTGATAACGTTAACTCAAAGGTATCCTCAACATTCTACAAAAGGAGTTTCTCACACAATGATGCTGGCACAAGTGATCACATATCTGGGGCAGTAGAGGAGGATGTTCAAAGTACAAGTAAACCAGGTAGTATCGCTAATGTTAGCAAGTTAAAAAGCTCAACCTCCCTTGGGGAAAGAGATAACTTATCTGAAGACATCCGCAAGTATACCATAGGCGCTAGAGCTACCGATTCGGCAAGAGTTACAAAGTTCAATAAGGTGCTTTCTGGAACAGTGGTTATATTAGACAAATTGCGTGAGTTAGCTTGGAGTGGTGTTCCAGATTATATGCGTCCTAAAGTGTGGCGACTCCTCTTGGGATATGAACCACCTAATTCAGATAGAAAGGAGGGAGTTCTGGGAAGGAAACGCGGAGAGTATCTTGACTGTATTTCTCAATATTATGATATTCCTGATTCAGAACGTTCAGATGACGAGGTCAACATGCTTCGCCAGATTGCCGTTGATTGTCCAAGAACTGTACCTGATGTTACTTTCTTCCAGCAACAACAAGTTCAGAAATCATTGGAACGTATTCTTTATGCATGGGCCATTCGACATCCTGCTAGTGGATATGTTCAGGGGATAAATGATCTTGTTACACCGTTTTTAGTTGTTTTCATATCAGAATACTTAGAAGGGGGTATAGATGATTGGACTATGTCTGATTTATCTTCAGACAAAATCTCTAATATAGAGGCTGACTGCTACTGGTGTTTGTCAAAGTTGCTTGACGGTATGCAAGACCATTACACATTTGCTCAACCTGGAATTCAGAGGCTTGTTTTTAAATTGAAAGAGTTGGTCAGGAGGATCGATGATCCAATTTCACAGCATATAGAGGATCAGGGACTTGAGTTTCTTCAATTTGCTTTCCGCTGGTTCAACTGTCTTCTGATCCGCGAGATACCGTTCGATCTCATCACACGCCTTTGGGACACATATCTAGCTGAAGGAGATGCCTTACCAGACTTCCTCGTGTATATATTTGCCAGTTTCCTTCTAACGTGGTCAGATAAACTCCAGAGCTTGGAATTCCAGGAGTTGGTAATGTTCCTTCAACACCTTCCAACTCAGAACTGGACTCACCAGGACCTCGAGATGGTGCTTTCACGGGCATTTATGTGGCACAGTATGTTCAACAACTCTCCAAGCCATTTCGCTAGCTGA 1368 0.4276 MNKPPREDHERSNNNTVTTLDSRFSQTLRNVQGLLKGRSMPGKVLMSRRSEPSDNVNSKVSSTFYKRSFSHNDAGTSDHISGAVEEDVQSTSKPGSIANVSKLKSSTSLGERDNLSEDIRKYTIGARATDSARVTKFNKVLSGTVVILDKLRELAWSGVPDYMRPKVWRLLLGYEPPNSDRKEGVLGRKRGEYLDCISQYYDIPDSERSDDEVNMLRQIAVDCPRTVPDVTFFQQQQVQKSLERILYAWAIRHPASGYVQGINDLVTPFLVVFISEYLEGGIDDWTMSDLSSDKISNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPISQHIEDQGLEFLQFAFRWFNCLLIREIPFDLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQSLEFQELVMFLQHLPTQNWTHQDLEMVLSRAFMWHSMFNNSPSHFAS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2448 455 Gene3D - 131 184 - -
Mal7g2448 455 SMART tbc_4 155 411 IPR000195 -
Mal7g2448 455 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 137 345 IPR035969 -
Mal7g2448 455 MobiDBLite consensus disorder prediction 38 59 - -
Mal7g2448 455 Pfam Rab-GTPase-TBC domain 162 406 IPR000195 -
Mal7g2448 455 Gene3D - 320 455 - -
Mal7g2448 455 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 195 319 - -
Mal7g2448 455 PANTHER GTPASE-ACTIVATING PROTEIN GYP1-LIKE 8 452 - -
Mal7g2448 455 ProSiteProfiles TBC/rab GAP domain profile. 158 385 IPR000195 -
Mal7g2448 455 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 321 443 IPR035969 -
Mal7g2448 455 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 8 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2448 Mal-Chr7 85008195 85013682 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2448 K20360 - gmx:100819281 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0433 4 3744095 3752178 Mal7g2448 7 85008195 85013682 PCT