Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0433 ATGAACAACAACAACAACACCACCAACAACAAAGACACTAGTACCATAGGAATCCTTGATTCCCGATTCAATCAAACCCTCAGAAATGTTCAAGGGTTACTCAAGGGTCGTAGCATTCCTGGTAAAATATTATTGAGCCAGAGGGTTGATCCGATAGATAATTCGGGCTTATACTCGCCAACTTACCAAAGGAGTTCCTCATATAGTGATACTGGCATGAGCGATCGCGCAACTGAGACAGTAGAGGAGGAAGTTCACAGTGGAAGCAAACCATTTGGTATTACCAACGATAATAAATCAAAAACATCAACCTCCCATGTAGAGAACCCGTCTGAAGAAGTCCGTAAATCTTCCATGGGTGGCAGGACTACTGATTCTGCAAGAGTTATGAAGTTCACAAAGGTTCTTTCTGGAACCATGGTTATATTAGACAAATTGCGTGAATTAGCTTGGAGTGGTGTTCCAGATTATATGCGTCCGACAGTGTGGAGAGTTCTCTTGGGATATGCACCAACTAATTCAGATAGAAGGGAGGGAGTTTTGAGAAGGAAGCGGCTCGAGTATCTTGATTGTGTTTCTCAGTATTATGACATTCCTGATACAGAACGCTCAGACGATGAGATCAGCATGCTTCGCCAGATTGCCGTTGATTGTCCAAGAACTGTACCTGATGTTTCATTCTTCCAGCAACCACAAGTTCAGAAATCACTGGAGCGTATTCTTTACGCATGGGCCATTCGACATCCAGCAAGTGGATATGTTCAGGGGATAAATGATCTTGTCACGCCATTTTTTGTTGTTTTCCTATCAGAATACTTAGAAGGGAGCATAGATAACTGGACAATGTCCGATTTATCTTCAGATAAAATCTCTAATGTAGAGGCTGACTGCTATTGGTGCTTGACTAAATTGCTTGATGGTATGCAAGACCATTACACATTTGCTCAACCAGGAATTCAAAGGCTTGTCTTTAAGTTGAAGGAATTGGTCAGGAGGATTGACGATCCTGTTTCGAGCCATATGGAGAATCAGGGATTGGATTTTCTTCAATTTGCTTTCCGCTGGTTCAATTGTCTTCTAATCCGTGAGATACCCTTCCAACTTGTCACACGCCTTTGGGACACATATCTAGCCGAAGGAGATGCCTTACCAGACTTCCTTGTGTATATATTTGCCAGTTTTCTTCTTACGTGGTCAGACGAAATTCAGAAGCTTGATTTTCAAGAGTTAGTAATGTTCCTTCAACACCTTCCAACTCAAAACTGGACTGATCAGGAACTCGAGATGGTACTCTCTCGTGCATTTATGTGGCACAGCATGTTCAACAACTCTCCTAGCCATTTAGCTGCCTAA 1353 0.4235 MNNNNNTTNNKDTSTIGILDSRFNQTLRNVQGLLKGRSIPGKILLSQRVDPIDNSGLYSPTYQRSSSYSDTGMSDRATETVEEEVHSGSKPFGITNDNKSKTSTSHVENPSEEVRKSSMGGRTTDSARVMKFTKVLSGTMVILDKLRELAWSGVPDYMRPTVWRVLLGYAPTNSDRREGVLRRKRLEYLDCVSQYYDIPDTERSDDEISMLRQIAVDCPRTVPDVSFFQQPQVQKSLERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWTMSDLSSDKISNVEADCYWCLTKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSSHMENQGLDFLQFAFRWFNCLLIREIPFQLVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDEIQKLDFQELVMFLQHLPTQNWTDQELEMVLSRAFMWHSMFNNSPSHLAA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0433 450 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 447 - -
Mal4g0433 450 Gene3D - 315 450 - -
Mal4g0433 450 SMART tbc_4 150 406 IPR000195 -
Mal4g0433 450 ProSiteProfiles TBC/rab GAP domain profile. 153 380 IPR000195 -
Mal4g0433 450 Pfam Rab-GTPase-TBC domain 157 402 IPR000195 -
Mal4g0433 450 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 130 340 IPR035969 -
Mal4g0433 450 MobiDBLite consensus disorder prediction 54 75 - -
Mal4g0433 450 Gene3D - 130 181 - -
Mal4g0433 450 MobiDBLite consensus disorder prediction 91 105 - -
Mal4g0433 450 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 2 447 - -
Mal4g0433 450 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 316 438 IPR035969 -
Mal4g0433 450 MobiDBLite consensus disorder prediction 54 122 - -
Mal4g0433 450 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 189 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0433 Mal-Chr4 3744095 3752178 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0433 K20360 - gmx:100776049 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0433 4 3744095 3752178 Mal4g0433 4 3744095 3752178 ECH
Mal4g0433 4 3744095 3752178 Mal7g2448 7 85008195 85013682 PCT