Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2248 ATGGCAGCGAATTCTTCTAATGGAGATCAATCAGCAACATCTAAGCAACCTCCTTTGCCATCTCCCCTGCGTTTCTCCAAATTCTTTCAGTCTAACATGAGAATCTTGGTTACCGGAGGAGCTGGTTTCATCGGTTCTCACCTTGTCGATAGATTGATGGAAAATGAAAAGAATGAGGTCATTGTTGCTGATAACTTCTTCACTGGATCGAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAACTTATCCGTCATGATGTCACTGAGACTTTGATGATTGAGGTGGATCAGATCTACCATCTTGCATGCCCTGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTGATTGGCACTCTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTGCTTACATCAACTTCGGAGGTATATGGGGATCCTCTTGAGCATCCCCAACCTGAAAGCTATTGGGGAAATGTTAACCCTATTGGAGTTCGTAGCTGCTATGACGAGGGGAAACGTGTGGCCGAGACTTTGATGTTTGATTATCATAGGCAACATGGAATAGAAATACGTGTTGCAAGAATCTTCAACACATATGGGCCACGCATGAATATTGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCACTGCGTGGTGAACCCTTGACCGTCCAAGCGCCAGGAACGCAAACTCGCAGTTTCTGCTATGTCTCTGACCTGGTTGATGGACTTATCCGTCTCATGGGAGGATCGGACACTGGTCCAATCAATCTTGGCAACCCAGGTGAGTTCACAATGATGGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAAATGTGGAGATAAAGATAGTGGAGAATACTCCCGATGATCCAAGACAGAGAAAACCGGACATAACCAAAGCAAAAGAATTGCTTGGCTGGGAACCAAAGGTCAAGCTGAGTGATGGTCTTCCTCTTATGGAAGTAGATTTTCGTTTGAGGCTTAGAGTTGACAAGAAAAAATAA 1041 0.4371 MAANSSNGDQSATSKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTETLMIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQAPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMMELAETVKELINPNVEIKIVENTPDDPRQRKPDITKAKELLGWEPKVKLSDGLPLMEVDFRLRLRVDKKK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2248 346 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 345 IPR044516 GO:0042732|GO:0048040|GO:0070403
Mal7g2248 346 CDD UGD_SDR_e 33 337 - -
Mal7g2248 346 Gene3D - 30 154 - -
Mal7g2248 346 Gene3D - 155 339 - -
Mal7g2248 346 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 345 - -
Mal7g2248 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 332 IPR036291 -
Mal7g2248 346 Pfam GDP-mannose 4,6 dehydratase 36 330 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2248 Mal-Chr7 79888083 79931824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2248 35 329 Miscellaneous Gene Families AT4G00110 24.545 3.18e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2248 K08678 - gmx:100782830 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2248 7 79888083 79931824 Mal7g2248 7 79888083 79931824 ECH
Mal4g0570 4 5699865 5703749 Mal7g2248 7 79888083 79931824 ECH
Mal7g2248 7 79888083 79931824 Mal4g0570 4 5699865 5703749 PCT