Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0570 ATGGCGGCGAATTCGTCTAATGGAGATCAGCAAACAACAAAGCAACCTCCCCAGCCATCTCCGTTGCGATTTTCCAAATTCTTTCAGTCCAATATGAGAATTTTGGTGACCGGAGGAGCTGGTTTTATTGGTTCTCACCTAGTTGACAGACTGATGGAAAATGAAAAAAATGAGGTAATTGTAGCTGATAACTACTTCACTGGATCTAGAGACAACCTTAAAAAATGGATTGGTCATCCGAGATTTGAGCTAATTCGTCACGATGTGACAGAGACACTGTTGGTTGAGGTTGATCGGATCTACCATCTTGCCTGCCCTGCTTCTCCAATTTTCTACAAATACAATCCTGTAAAGACAATAAAGACTAATGTAATTGGAACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGACCCTCTTGTCCATCCACAACCAGAAACTTATTGGGGAAATGTCAATCCTATTGGAGTTCGGAGTTGCTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGCATTGCCAGAATCTTCAACACATATGGACCACGCATGAATATCGATGATGGGCGTGTCGTCAGCAACTTTATTGCTCAAGCAATTCGTGGTGAACCCTTAACAGTCCAACTTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGCCTTATTCGTCTCATGGAAGGAGAAAACACTGGTCCAATCAACATTGGGAACCCAGGCGAGTTTACTATGACTGAACTTGCTGAGAATGTGAAGGAGCTTATTAATCCAGCTGTGGAGATAAAGATGGTGGAGAACACTCCGGACGATCCTCGGCAAAGAAAACCAGACATAACAAAAGCAACGGAATTGCTTGGATGGGAACCAAAGGTCAAGTTGCGAGATGGCCTTCCTCTTATGGAAGATGATTTCCGTCTAAGGCTTGGAGTTCCCAGAAAGAACTAA 1038 0.4335 MAANSSNGDQQTTKQPPQPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSRDNLKKWIGHPRFELIRHDVTETLLVEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKATELLGWEPKVKLRDGLPLMEDDFRLRLGVPRKN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0570 345 CDD UGD_SDR_e 32 336 - -
Mal4g0570 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 345 IPR044516 GO:0042732|GO:0048040|GO:0070403
Mal4g0570 345 Gene3D - 31 338 - -
Mal4g0570 345 Pfam GDP-mannose 4,6 dehydratase 35 329 IPR016040 -
Mal4g0570 345 MobiDBLite consensus disorder prediction 1 22 - -
Mal4g0570 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 336 IPR036291 -
Mal4g0570 345 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0570 Mal-Chr4 5699865 5703749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0570 29 328 Miscellaneous Gene Families AT1G02000 23.582 2.41e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0570 K08678 - twl:120013598 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0570 4 5699865 5703749 Mal4g0570 4 5699865 5703749 ECH
Mal4g0570 4 5699865 5703749 Mal7g2248 7 79888083 79931824 ECH
Mal7g2248 7 79888083 79931824 Mal4g0570 4 5699865 5703749 PCT