LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g2090	ATGTACAAGAACCAGCTACAAGAGCTGGCACAAAGAAGCTGTTTCAACCTACCATCGTACACGTGCTTAAGAGAAGGTCCTGATCACGCGCCGCGGTTCAAAGCTACCGTTAACTTTAACGGCGAGATCTTTGAGAGTCCTCAGTATTGTTCAACACTTCGTCAAGCGGAACATTCTGCTGCTGAGGTGGCACTTAGTTCTTTGTCTCATCGTGGTCCTTCTCATTCTCTTGCTGCAAAAATCCTTGATGAGACGGGAGTGTACAAGAATCTTTTACAAGAAATAGCACAAAGGGTAGGGGCTCCATTGCCGCAGTACACAACTTTCCGGTCAGGCCTAGGACATCTACCTGTTTTTACTGGGACGGTAGAATTAGCTGGAATCACATTTACTGGTGAGCATGCCAAGAATAAGAAACAAGCAGAGAAAAATGCAGCTATGGCCGCTTGGTCGTCTCTAAAGCAATTGGCAAAAGAAACTGCAAGCTCTTCGTCTGAACCGGACAACAATGATGAACTAGAACAGATCACCATAGCACGGGCCCTACTAAACTACCGTCTGAAGGAAAAGATGGCAATGTCAAATCCAAACGCTCTGATTTCTTTTCCAAACAAGTTTCAGTTTCAAAATCCAAGGCCAACCAGTCCTCAACCTCGGCCAGCAACATCAAAGATACTTCCCCTGATTTGCCAAAAGACAGTACCTCGAAGCAGGCATCCTGCAACGGCAGTGGCCAGCAGTGATCACAACTCCATTATGTCACCACTTTCTTCAACACAAGAAAGCCGATGGGCCCGTCGCCCTAAATTCCCTGCGGCAGGAGCAGCACCTTATGTTCCCATTCGACATATGCGATCATCGTGCCAGGGAATTGCACCTCCAGTTACCATAAGGAATGCAATACCTGTATTCTCCCCGCCACCAGCCGCAGTGTCCCCTCAAGTAATGCGGCCACTTCCTGTACGAGTTGCTCCTCCGATCAATATTCGGCAAGCAGTTCCAGTATTTGCTGCAGCTCCACAGGTTCGAAAAGATGAACCTGTTCCCATCAGCAAAGATGATCCGGCACAAGCACTATATGCTGCTACACCGCTTCAAGTAGATGAACCTGTTCCCATCAGTAAAGTCGATCCAGCACCTGCAGTTTATGCTGCTCCACCAGTTCTAATAGATGAACCTGTTACTGTCAGCAAAGTTGATCCAGCACCGGCAGAAAATGCTGCTCTACCAGTTCCAGTAGATGAATCTGTTCCTATCAGCAAAGATGATCCAGCTGCACCAGCAGTTAAAAAAGATGAAACTGTTCTCATCAGCAAAGATGATCCAGCGCCGACTAGTGGTGTAGATACAAATGACACCAAAACTGAGAATATTCCAGCAGAATCTGAGACAGCGCAGAGGTTGGAGCAGCTGAAAATTTTATTGTGA	1428	0.4706	MYKNQLQELAQRSCFNLPSYTCLREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSAAEVALSSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGEHAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEPDNNDELEQITIARALLNYRLKEKMAMSNPNALISFPNKFQFQNPRPTSPQPRPATSKILPLICQKTVPRSRHPATAVASSDHNSIMSPLSSTQESRWARRPKFPAAGAAPYVPIRHMRSSCQGIAPPVTIRNAIPVFSPPPAAVSPQVMRPLPVRVAPPINIRQAVPVFAAAPQVRKDEPVPISKDDPAQALYAATPLQVDEPVPISKVDPAPAVYAAPPVLIDEPVTVSKVDPAPAENAALPVPVDESVPISKDDPAAPAVKKDETVLISKDDPAPTSGVDTNDTKTENIPAESETAQRLEQLKILL*	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g2090	475	MobiDBLite	consensus disorder prediction	409	464	-	-
	Mal7g2090	475	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	1	70	IPR014720	-
	Mal7g2090	475	Gene3D	-	84	155	-	-
	Mal7g2090	475	SUPERFAMILY	dsRNA-binding domain-like	88	160	-	-
	Mal7g2090	475	MobiDBLite	consensus disorder prediction	444	464	-	-
	Mal7g2090	475	Gene3D	-	2	83	-	-
	Mal7g2090	475	MobiDBLite	consensus disorder prediction	243	264	-	-
	Mal7g2090	475	PANTHER	DOUBLE-STRANDED RNA-BINDING PROTEIN 2	1	349	-	-
	Mal7g2090	475	Pfam	Double-stranded RNA binding motif	88	153	IPR014720	-
	Mal7g2090	475	Pfam	Double-stranded RNA binding motif	2	68	IPR014720	-
	Mal7g2090	475	CDD	DSRM_AtDRB-like_rpt2	86	154	IPR044451	GO:0003725
	Mal7g2090	475	PANTHER	-	1	349	-	-
	Mal7g2090	475	CDD	DSRM_AtDRB-like_rpt1	1	69	IPR044450	GO:0003725
	Mal7g2090	475	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	87	155	IPR014720	-
	Mal7g2090	475	SUPERFAMILY	dsRNA-binding domain-like	2	68	-	-
	Mal7g2090	475	SMART	DRBM_3	2	69	IPR014720	-
	Mal7g2090	475	SMART	DRBM_3	88	154	IPR014720	-
	Mal7g2090	475	MobiDBLite	consensus disorder prediction	242	264	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g2090	Mal-Chr7	74888555	74892302	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g2090	-		-	gmx:100812728	543.502

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal7g2090	7	74888555	74892302	Mal7g2090	7	74888555	74892302	ECH
	Mal4g0684	4	7413849	7417346	Mal7g2090	7	74888555	74892302	PCT