Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0684 ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGCTGCTTCAATCTTCCTTCCTACACTTGCATTCGTGAAGGTCCTGATCACGCGCCGAGGTTTAAAGCTACCGTTAACTTTAACGGCGAGATCTTCGAAAGTCCTCACTACTGTTCAACTCTCCGTCAAGCTGAACACTCCGCCGCTGAAGTTGCTCTCAATTCTCTTTCCCACCGTGGTCCTTCTCACTCTCTCGCCGCTAAGATCCTCGATGAGACTGGAGTCTACAAGAACCTCTTACAAGAAATTGCACAACGAGTAGGGGCTCCATTGCCTCAGTACACAACATACAGATCAGGCCTAGGACATTTACCTGTTTTTACTGGGATAGTAGAATTGGCTGGAATCACATTTACTGGTGAACCTGCCAAGAATAAGAAACAAGCCGAGAAAAATGCAGCTATGGCAGCTTGGTCTTCTTTAAAGCAATTGGCAAAAGAGACTGCTAGCTCTTCAACTGAACCTGAGAACAATGACGAATTAGAACAGATCACTATAGCACGGGCTTTACTGAACTACCGTCTGAAGGAAAAGATGGCAATGTCTAATCCAAATGCTCCGATTCCATTTCAGAAGAAGTTTCAGATTCGTAATATCAGGCCAACTAGTTCCCAACCTCCTGCAACCACATCAAAGATCCTTCCCCTAATTTGCCAAAAGACAGGACCTCGACACAGACCTTCATCGGCTACAGCAAATGAAAATCCTCGAAGCCGGCATCCGCCAGCAGCAGCAACCAGTGACAAGTCCATTGTGCAGCCACCACAATCTTCTGCAGTAGAAAGCCGGGTGATCCGTCCTATGAAGTTCCCTGCAGCAGGAGCAGCACCTTATGTTCCCATTCGACAAATGCGAGCACCTTGCCATGGGATTGCACCTCCAGTGGCTGTGAGGACTGTAGTACCTGTGTTCTCTGCACCACCTCTTCCGCCACCTGCCTCAGTCCATCAAATAATACGGGCTCCTCCTGTACGAATTGCTCCTCCAGTCAGTATTCGGCAAGCTGTTCCTGTATTTGCTGCTCCACCACCAAGAAAAGATGAACCTGCCCCCGTCCAAAAAGATCTACCTGCCAGTAGTACCCCTGACGAGCAAGATAAGCTTCCAGCTAAAATTCTAGAGATGGGCAAAACTGAGAACAACCCAGCACAACCAGAGACTTTACGGAGTTTGGAGCAGCTGAAAATTTGA 1227 0.48 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIARALLNYRLKEKMAMSNPNAPIPFQKKFQIRNIRPTSSQPPATTSKILPLICQKTGPRHRPSSATANENPRSRHPPAAATSDKSIVQPPQSSAVESRVIRPMKFPAAGAAPYVPIRQMRAPCHGIAPPVAVRTVVPVFSAPPLPPPASVHQIIRAPPVRIAPPVSIRQAVPVFAAPPPRKDEPAPVQKDLPASSTPDEQDKLPAKILEMGKTENNPAQPETLRSLEQLKI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0684 408 Gene3D - 84 155 - -
Mal4g0684 408 MobiDBLite consensus disorder prediction 208 228 - -
Mal4g0684 408 Gene3D - 2 83 - -
Mal4g0684 408 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
Mal4g0684 408 MobiDBLite consensus disorder prediction 196 272 - -
Mal4g0684 408 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
Mal4g0684 408 PANTHER - 1 379 - -
Mal4g0684 408 SUPERFAMILY dsRNA-binding domain-like 88 159 - -
Mal4g0684 408 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Mal4g0684 408 MobiDBLite consensus disorder prediction 352 408 - -
Mal4g0684 408 SMART DRBM_3 2 69 IPR014720 -
Mal4g0684 408 SMART DRBM_3 88 154 IPR014720 -
Mal4g0684 408 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Mal4g0684 408 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Mal4g0684 408 Pfam Double-stranded RNA binding motif 88 153 IPR014720 -
Mal4g0684 408 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Mal4g0684 408 PANTHER RNA BINDING PROTEIN, PUTATIVE-RELATED 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0684 Mal-Chr4 7413849 7417346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0684 - - cam:101510954 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0684 4 7413849 7417346 Mal7g2090 7 74888555 74892302 PCT