Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1942 ATGCATACCCTTTCTACACCATCTTCCAATTCCATTACCTATCTGAACCGGGTTCGACCCTCGTTTAACCGGGTCGGTTCAGCTCCAAGCAGAATAAGCGTTAAATGTGGATACGGTTTTGAATTCTCAACCGGTTCAAGCCGAGCCGATTGGCAAAGCTCATGCGCTATTTTATCCAGCAAAGTAGTTTCACAGCAAGATGAATCTCCGGTCACCGGAAACGACCATATCTCCGCCGTCAACGGCTACAACACCGCCGTGACAGATCTTCAACTCATTCCAATCGGAAACAACAAACCACTTCAACCAAAGCCGTTAACCATCACCGACCTATCTCCGGCACCGATGCATGGTTCACAGCTCCGCGTCGCTTACCAAGGAGTTCCCGGAGCATACTCCGAAGCCGCCGCCGGAAAAGCTTATCCGAACAGCGAAGCCATGCCGTGCGATCAATTCGAGGTAGCTTTCCAATCGGTAGAACTCTGGATAGCTGATCGCGCAGTTCTGCCGGTGGAAAACTCACTCGGAGGATCAATTCACCGGAACTACGACCTCCTCCTCCGCCACCGCCTCCACATCGTCGGAGAAGTTCAACTACCAGTCCACCACTGTCTCCTCGCACTTCCCGGAGTCCGAAAAGAATATCTCACACGCGTGATTTCGCATCCACAAGCATTAGCTCAGTGCGAAAACACGCTTACAAAACTCGGCCTCAACGTAGCGCGTGAGGCCGTTGACGATACAGCTGGTGCCGCGGAGTTTATTGCTACAAAGAGCCTCTGCGACACTGCTGCTATCGCCAGTGCACGCGCTGCAGAGCTTTACGGATTAAATATCCTTGCTGATGGAATACAAGATGATCCTAATAACGTGACCCGGTTCGTTATGCTGGCAAGAGAACCCATAATTCCACGAACGGATCGTCCTTTCAAAACAAGCATTGTTTTTGCTCATGATAAAGGGACTTCAGTGCTTTTTAAAGTGCTTTCAGCTTTTGCGTTTAGGAATATCAGCTTAACTAAGATTGAATCTAGGCCTCATCGTGGCCGTCCAATTCGAGTTGTGGATGATGAAAGTGAAGGAACAGCTAAACATTTTGAGTATATGTTTTATATTGATTTTGAAGCTTCTATGGCTGAGGTTAGGGCACAAAATGCACTTGCTGAGGTTCAAGAATTTACATCTTTCTTGAGAGTTTTGGGGAGTTATCCTATGGATATGACACCTTGGAGCCCTTCTTCTACTTCTCATAGGGGAGATTTGCTTTGA 1269 0.4815 MHTLSTPSSNSITYLNRVRPSFNRVGSAPSRISVKCGYGFEFSTGSSRADWQSSCAILSSKVVSQQDESPVTGNDHISAVNGYNTAVTDLQLIPIGNNKPLQPKPLTITDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNSEAMPCDQFEVAFQSVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALAQCENTLTKLGLNVAREAVDDTAGAAEFIATKSLCDTAAIASARAAELYGLNILADGIQDDPNNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRGRPIRVVDDESEGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSTSHRGDLL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1942 422 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 26 414 - -
Mal7g1942 422 CDD ACT_CM-PDT 311 404 - -
Mal7g1942 422 Gene3D - 123 295 - -
Mal7g1942 422 Gene3D - 306 407 - -
Mal7g1942 422 SUPERFAMILY Periplasmic binding protein-like II 122 305 - -
Mal7g1942 422 SUPERFAMILY ACT-like 294 406 IPR045865 -
Mal7g1942 422 CDD PBP2_Ct-PDT_like 122 301 - -
Mal7g1942 422 ProSiteProfiles ACT domain profile. 313 404 IPR002912 -
Mal7g1942 422 ProSitePatterns Prephenate dehydratase signature 1. 275 297 IPR018528 GO:0004664|GO:0009094
Mal7g1942 422 ProSiteProfiles Prephenate dehydratase domain profile. 122 299 IPR001086 GO:0004664|GO:0009094
Mal7g1942 422 Pfam Prephenate dehydratase 123 301 IPR001086 GO:0004664|GO:0009094
Mal7g1942 422 Gene3D - 202 288 - -
Mal7g1942 422 ProSitePatterns Prephenate dehydratase signature 2. 339 346 IPR018528 GO:0004664|GO:0009094
Mal7g1942 422 PANTHER AROGENATE DEHYDRATASE 26 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1942 Mal-Chr7 69598795 69600063 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1942 K05359 - gmx:100797636 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1942 7 69598795 69600063 Mal7g1942 7 69598795 69600063 ECH
Mal4g0830 4 9943287 9944555 Mal7g1942 7 69598795 69600063 PCT