Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0830 ATGAACACTCTATCTCCATCTCCCTCTTCCAACACCCTCAATTTCACCCACATAACACGGCCGCGTTTATTGCCAAACCGGCTCGGTCCGAATCGGTTTTCCATCAAATGTGCTTACGGTTCAAGCTACGATTCCGGTTCAACCCGAACCGATTGGCAAAGCTCATGCACCATCTTATCTAGCAAAGTTGTTTCAATGGAACAACCTTCCACCGCCGTCAACGGCGGCGCCGATGACCATTTCGCCGCCATCAACGGCCACAAAACAAACGTCACCGATCTACAACTCGTTCCCATCGGAAAACTCGGCAGTGAAATTTCCAAACCACTTCCACCAAAACCGTTAACAATCTCCGACCTAGCTCCGGCTCCGATGCACGGTTCAAATCTCCGCGTCGCTTACCAAGGAGTCCCCGGAGCATACTCCGAAGCCGCCGCCGGGAAAGCCTATCCAAACTGCGAAGCAATTCCCTGCGACCAATTCGAAGTTGCGTTCCAAGCCGTTGAGCTTTGGATCGCCGATCGCGCAGTTCTCCCGGTGGAAAATTCCCTCGGCGGATCTATCCATCGCAACTACGATCTCCTCCTCCGTCACCGCCTCCACATCGTCGGAGAAGTTCAACTCCCGGTGCATCACTGTCTCCTCGCTCTCCCCGGAATCCGAAAAGAATATCTCACACGTGTCATCTCTCATCCACAAGCTTTATCTCAATGCGAACACACATTAACAAAACTCGGCCTCAACGTCGCACGTGAAGCCGTTGACGATACCGCCGGTGCCGCGGAGTTTGTCGCTACCAACAATCTCCGCGACACTGCAGCTATCGCCAGCGCACGTGCGGCGGAGCTTTACGGATTAAATATCCTAGCTGATGGAATTCAAGATGACCCGAGTAACGTGACCCGATTCGTTATGTTAGCCCGAGAACCGATAATTCCACGTACGGATCGACCATTTAAAACGAGTATTGTTTTCGCTCATGATAAAGGAACTTCGGTGCTATTCAAAGTGCTTTCAGCTTTTGCGTTTAGGAATATTAGCTTAACGAAGATTGAATCAAGGCCTCATCGTAACCGTCCGATTAGGCTTGTGGATGATGCTAATGTTGGAACAGCGAAGCATTTTGAGTATTTGTTTTATGTTGATTTTGAAGCTTCTATGGCTGAAGTTAGAGCACAAAATGCGTTGGCTGAAGTTCAGGAATTCACGTCTTTCTTGAGAGTTTTGGGTAGTTACCCTATGGACATGACACCTTGGAGTGCTCCTTAA 1269 0.4972 MNTLSPSPSSNTLNFTHITRPRLLPNRLGPNRFSIKCAYGSSYDSGSTRTDWQSSCTILSSKVVSMEQPSTAVNGGADDHFAAINGHKTNVTDLQLVPIGKLGSEISKPLPPKPLTISDLAPAPMHGSNLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGIRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEFVATNNLRDTAAIASARAAELYGLNILADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYLFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSAP* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0830 422 Gene3D - 215 296 - -
Mal4g0830 422 ProSiteProfiles ACT domain profile. 322 413 IPR002912 -
Mal4g0830 422 CDD ACT_CM-PDT 320 413 - -
Mal4g0830 422 PANTHER AROGENATE DEHYDRATASE 41 420 - -
Mal4g0830 422 ProSiteProfiles Prephenate dehydratase domain profile. 131 308 IPR001086 GO:0004664|GO:0009094
Mal4g0830 422 ProSitePatterns Prephenate dehydratase signature 1. 284 306 IPR018528 GO:0004664|GO:0009094
Mal4g0830 422 CDD PBP2_Ct-PDT_like 129 310 - -
Mal4g0830 422 Gene3D - 126 214 - -
Mal4g0830 422 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 41 420 - -
Mal4g0830 422 Pfam Prephenate dehydratase 132 310 IPR001086 GO:0004664|GO:0009094
Mal4g0830 422 Gene3D - 315 416 - -
Mal4g0830 422 ProSitePatterns Prephenate dehydratase signature 2. 348 355 IPR018528 GO:0004664|GO:0009094
Mal4g0830 422 SUPERFAMILY Periplasmic binding protein-like II 131 314 - -
Mal4g0830 422 SUPERFAMILY ACT-like 303 415 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0830 Mal-Chr4 9943287 9944555 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0830 K05359 - gmx:100797636 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0830 4 9943287 9944555 Mal4g0830 4 9943287 9944555 ECH
Mal4g0830 4 9943287 9944555 Mal7g1942 7 69598795 69600063 PCT