Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1854 ATGGCTGAGGTGCTACACTCTTCTGATCCCATTCACATTCACACAACCGACCAAGAACAACAACAACAACAACATTCACCACCCTCTTCTTCATCTTCTTCTTTTTCTTCTCTAGCAGTGGCAGTGAGCAATAGTTTTTCTAATGCAACTGAGTGTGACGCAGAGGAAAAAACTGTAACAGAAAGGAAAAATACAGAGCAAGAGCTATCCCTTTTGGCCATTCTTGTGACCCTTTTCAGGAAATCCATAGTTACTTGCTCAAGTGATGCTTCTGCCATGGAAATCAGTCATCCTACTAACGTGCGCCATGTTGCGCATGTTACTTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTCATGAGTTTGAGCCTCAACTCCCCACTATACCTCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGAAATTATCATATGACACAAGAGGGAACATTGTACCAACAATTTTACTACTAATGCAAGAACACTTGTATGCAAAAGGAGGATTACAGGCAGAGGGAATTTTCAGAATTAATGCAAACAATAGTCAAGAGGAATATGTTAGGGATCAATTAAATAAAGGAGTGGTCCCAGAAGGCATTGATGTACATTGTTTGGCAGGATTGATTAAGGCTTGGTTTAGGGAGCTACCAAGAGGTGTTCTGGATTCTTTATCTCCAGAGCAGGTAATGCAATGTCAAACAGAAGAGGATTGCGCCGAACTGACGAGTCAGTTACCGCATACTGAAGCTTCCCTTTTGAACTGGACTATCAATCTGATGGCTGATGTTGTACAAGAAGAACATCTGAATAAGATGAATGCTCGCAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCGGACCCTTTGACTGCATTCATGTATGCAGTTCAAGTGATGAACTTTTTGAAGACACTAGTATCAAGGACACTGAAGGCAAGGAAGGATTCTGATGTAGAATCATCACCTGAATTTTATATAAAGACTTTTGATGAGAATGAGGAACATAGTCATTATGTTGCAACAGAAAATTAA 1053 0.4055 MAEVLHSSDPIHIHTTDQEQQQQQHSPPSSSSSSFSSLAVAVSNSFSNATECDAEEKTVTERKNTEQELSLLAILVTLFRKSIVTCSSDASAMEISHPTNVRHVAHVTFDRFNGFLGLPHEFEPQLPTIPPSASATVFGVSTESMKLSYDTRGNIVPTILLLMQEHLYAKGGLQAEGIFRINANNSQEEYVRDQLNKGVVPEGIDVHCLAGLIKAWFRELPRGVLDSLSPEQVMQCQTEEDCAELTSQLPHTEASLLNWTINLMADVVQEEHLNKMNARNIAMVFAPNMTQMADPLTAFMYAVQVMNFLKTLVSRTLKARKDSDVESSPEFYIKTFDENEEHSHYVATEN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1854 350 CDD CRIB 93 136 - -
Mal7g1854 350 MobiDBLite consensus disorder prediction 1 35 - -
Mal7g1854 350 Gene3D CRIB domain 90 128 IPR036936 -
Mal7g1854 350 Pfam P21-Rho-binding domain 94 122 IPR000095 -
Mal7g1854 350 Gene3D Rho GTPase activation protein 129 325 IPR008936 GO:0007165
Mal7g1854 350 ProSiteProfiles Rho GTPase-activating proteins domain profile. 140 320 IPR000198 GO:0007165
Mal7g1854 350 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 345 - -
Mal7g1854 350 Pfam RhoGAP domain 157 291 IPR000198 GO:0007165
Mal7g1854 350 SUPERFAMILY GTPase activation domain, GAP 135 314 IPR008936 GO:0007165
Mal7g1854 350 MobiDBLite consensus disorder prediction 14 35 - -
Mal7g1854 350 CDD RhoGAP 157 314 - -
Mal7g1854 350 ProSiteProfiles CRIB domain profile. 95 108 IPR000095 -
Mal7g1854 350 SMART PBD_5 95 129 IPR000095 -
Mal7g1854 350 PANTHER MKIAA1688 PROTEIN 1 345 IPR044785 GO:0005096
Mal7g1854 350 SMART RhoGAP_3 154 314 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1854 Mal-Chr7 65162669 65165347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1854 - K20642 mtr:MTR_4g052850 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1854 7 65162669 65165347 Mal7g1854 7 65162669 65165347 ECH
Mal4g1390 4 20376912 20379912 Mal7g1854 7 65162669 65165347 PCT