Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1556 ATGGCCGCCGTAACTTCTTCTTTGTCTTTCTCAACACTCACTCAATCTTCTCAAAGGAAATTAACCACCTTTTCTTCCACTCGTTTGCTTGGTTCCGATTCAGATGCTGTTCGATTCCGTTTGAGTTTATCGTTGCGCTATGTTGGTGTTCGAACTTTCAATTCCGTTTCCAAAATCGTCGTTCGGTGCTCCTCTTCTGAGTCAGACCCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCAAGGCATATAAGCGACCAATACCTAGTATATACAACTCCGTGCTGCAGGAGCTCATTGTCCAGCAACATCTGATGAGATACAAGAAGTCTTACCGCTATGATCCTGTATTTGCTCTTGGCTTTGTCACTGTATATGACCAACTCATGGAAGGGTATCCTAGTGATGAGGATAGGGATGCCATCTTCCAAGCATACATTAACGCACTGAAGGAAGATCCAGCCCAATACAGAGTAGATGCACAAAAGTTGGAAGAATGGGCTCGTGCTCAAAATTCGACTTCCCTTATTGAGTTTTCATCCAGAGAAGGAGAAGTTGAGGGGATTTTAAAGGATATTGCAGAAAGAGCAGGTGGAAAGGGGGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGCCTTTTTCGTCTTCTTGAGTTGGCAAATGCAATGGAACCTACAATATTGGAAAAGCTTTGTTCGGCTTTGAATATCAACAAAAGAAGTGTGGATCGGGACTTGGACGTGTATCGCAATCTGCTTTCTAAGTTGGTACAAGCTAAAGAGCTGCTGAAGGAATATATTGACAGGGAAAAGAAGAAAATAGAAGAAAGGGCGGAACCACAAAAGGCTAATGAGGCCATTTCAAAATGTCTGGGACAAGAGGAGTTTTCTAACATGATTGCCCGGTAA 909 0.4246 MAAVTSSLSFSTLTQSSQRKLTTFSSTRLLGSDSDAVRFRLSLSLRYVGVRTFNSVSKIVVRCSSSESDPPTVSETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKKSYRYDPVFALGFVTVYDQLMEGYPSDEDRDAIFQAYINALKEDPAQYRVDAQKLEEWARAQNSTSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCSALNINKRSVDRDLDVYRNLLSKLVQAKELLKEYIDREKKKIEERAEPQKANEAISKCLGQEEFSNMIAR* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1556 302 Coils Coil 249 269 - -
Mal7g1556 302 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 288 - -
Mal7g1556 302 Hamap Protein Thf1 [thf1]. 67 275 IPR017499 GO:0010207|GO:0015979
Mal7g1556 302 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 70 273 IPR017499 GO:0010207|GO:0015979
Mal7g1556 302 Pfam Thylakoid formation protein 72 277 IPR017499 GO:0010207|GO:0015979
Mal7g1556 302 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 288 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1556 Mal-Chr7 50504592 50508755 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1556 - - aip:107632658 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1556 7 50504592 50508755 Mal7g1556 7 50504592 50508755 ECH
Mal4g1217 4 17103694 17106752 Mal7g1556 7 50504592 50508755 PCT