Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1217 ATGGCTGCTCTCACTTCTTTGTCATTCTCAGCAACAACTCAATGCTCACAGAGAAAATCAACTTTGCCTTCTACTCGTTTCCTTGCTTCAAGTTCTGATATGTTTGGAATTCGGACAGATTCCTCGTACCATTGTATTGGTGTTAGAGTTAGCAATTCTGCATCTAAAATGGTTGTTCAATGCATGTCTTCTGTCACAGATGTTCCCAGCGTTTCAGAGACAAAGCTAAATTTCCTAAAGGCATATAAACGACCAATCCCTAGTATCTATAACAATGTACTGCAGGAGCTCATTGTTCAACATCATTTAATGAGATACAGGACATCATACCGATATGATTCTGTATTTGCTCTTGGTTTTGTCACTGTCTATGATAAACTCATGGAAGGGTATTCTAGTGAAGAGGAGCGAGATACCATCTTCAAAGCTTATATTAATGCATTGAAGGAAGATCCAGAACAATACAGAATAGATGCAAAGAAGTTGGAAGAGTGGGCTAAGGCTCAAAACTCAACTTCACTGGTTGAGTTTTCATCCAAAGAAGGAGAAGTTGAAGGGGTTTTAAAGGATATTGCAGAAAGAGCAGGACAAAAGGGTGAATTCAGTTATAGTCGTTTCTTTGCAGTAGGCCTTTTTCGCCTTCTTGAGTTGGCAAATGCAACAGAACCAACAATTTTAGACAAGCTTTGTGCGGCTTTGAACATCGACAAAAGAAGCGTTGATCGGGACTTGGATGTGTACCGTATGCTGCTTTCTAAGCTGGTTCAAGCAAAAGAGCTGCAAAGGGAATTCATTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGGTGGAACCACAGAAGGCTAATGGGGCCATTACAAAATGA 864 0.4028 MAALTSLSFSATTQCSQRKSTLPSTRFLASSSDMFGIRTDSSYHCIGVRVSNSASKMVVQCMSSVTDVPSVSETKLNFLKAYKRPIPSIYNNVLQELIVQHHLMRYRTSYRYDSVFALGFVTVYDKLMEGYSSEEERDTIFKAYINALKEDPEQYRIDAKKLEEWAKAQNSTSLVEFSSKEGEVEGVLKDIAERAGQKGEFSYSRFFAVGLFRLLELANATEPTILDKLCAALNIDKRSVDRDLDVYRMLLSKLVQAKELQREFIDREKKKREERVEPQKANGAITK* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1217 287 Pfam Thylakoid formation protein 71 275 IPR017499 GO:0010207|GO:0015979
Mal4g1217 287 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 67 272 IPR017499 GO:0010207|GO:0015979
Mal4g1217 287 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 286 - -
Mal4g1217 287 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 286 IPR017499 GO:0010207|GO:0015979
Mal4g1217 287 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Mal4g1217 287 MobiDBLite consensus disorder prediction 268 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1217 Mal-Chr4 17103694 17106752 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1217 - - gmx:100796767 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1217 4 17103694 17106752 Mal4g1217 4 17103694 17106752 ECH
Mal4g1217 4 17103694 17106752 Mal7g1556 7 50504592 50508755 PCT