Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0158 ATGCCTCTCAGACTCAAAATCAAGCGAAAGCTTGCGCAAAGATCAGAAAGAGTAAAGTCTGTGGATCTACATCCAACAGAACCATGGATTCTAGCAAGTTTATACTCTGGGACTGTCTGTATCTGGAACTACCAATCTCAGACCATGGTTAAGTCTTTTGAGGTTACTGAGTTACCTGTTAGGTCAGCCAAGTTTATTGCACGCAAACAGTGGGTTGTTGCCGGAGCAGATGATATGTTTATTCGTGCATATAATTACAATACAATGGATAAAGTTAAAGTATTTGAGGCACACACAGATTACATTAGATGCGTGGCTGTTCATCCCACCCTTCCCTATGTGCTATCTTCGTCTGACGATATGCTCATAAAGCTTTGGGATTGGGAAAAAGGCTGGATCTGTACCCAGATATTTGAGGGACATTCTCATTATGTCATGCAAGTGACATTCAACCCTAAAGATACAAACACCTTTGCCAGTGCATCACTTGATCGGACCATAAAGATTTGGAATCTTGGGTCTCCTGACCCAAATTTTACCTTGGATGCCCATCAAAAAGGAGTAAATTGCGTTGATTATTTTACGGGTGGTGACAAACCTTATCTAATTACTGGTTCTGATGATCACACTGCCAAGGTATGGGATTATCAGACCAAAAGTTGTGTCCAGACTCTAGATGGTCACACTCACAATGTATCTGCTGTATGCTTTCACCCTGAGCTTCCTATTATCATTACTGGCTCTGAGGATGGTACAGTCCGCATTTGGCATTCAACAACTTACAGGCTTGAGAACACATTGAACTATGGTCTTGAAAGAGTTTGGGCTATTGGATACCTGAAGGGTTCACGTCGGGTTGTGATTGGATATGATGAAGGAACTATAATGGTCAAACTTGGTCGAGAAGAACCTGTAGCTAGCATGGACAACAGTGGGAAGATCATTTGGGCAAAGCATAACGAGATTCAAACTGTCAATATAAGGAGTGTAGGAGCAGATGCGGAGATTGCTGATGGAGAAAGGTTACCATTGGCTGTTAAGGAGTTGGGCACCTGTGATCTCTACCCACAAAGTTTAAGGCACAATCCAAATGGGAGGTTTGTTGTTGTTTGCGGGGATGGTGAGTATATTATATATACTGCCTTGGCATGGAGAAATAGGTCATTTGGTTCAGCACTGGAAATTGTTTGGTCTTCGGATGGAGAATATGCTGTAAGAGAAAGTACTTCAAAGATTAAAATTTTCAGCAAAACTTTCCAGGAAAAGAAGAGTATCCGACCAACTTTTTCAGCCGAACGAATATTTGGTGGCACTGTGTTGGCAATGTGCTCAAATGATTTCATCTGCTTTTATGATTGGGCTGAATGCAGATTGATAAGGCGTATTGATGTGAATGTAAAAAACCTCTATTGGGCTGATAGCGGGGATCTAGTGGCGATTGCTAGTGATACATCATTCTACATTCTAAAGTACAATCGTGATGTTGTTTCATCATATTTAGATAGTGGGAGATCTGTGGATGAGCAAGGTGTTGAAGATGCCTTCGAGCTCCTTCATGAAATGAGTGAGCGTGTCAGGACAGGGCTCTGGGTTGGGGATTGTTTTATCTATACCAATTCTTCTTGGAGGCTTAATTACTGTGTTGGTGGTGAGGTAACAACAATGTTTCACTTGGACCGTCCAATGTACTTGTTGGGATATCTTCCCAGCCAAAGTAGAGTTTATTTGATTGACAAAGAATTCAATGTTGTGGGCTTCACGCTGCTTTTAAGCTTGATTGAATACAAGACTCTTGTGATGCGTGGTGATTTCGAAAGGGCTAATGAAATTCTGCCATCAATTCCAAAAGAGCATCATAACAGCGTGGCTCATTTCCTGGAATCAAGAGGCATGATAGAGGATGCTCTTGAAGTAGCTACTGACCCTGAGTACAGATTTGATCTAGCCATACAGCTTGGAAGATTAGAGGTTGCAAAGGCTATTGCTATAGAAGTGAAGAGTGAGTCTAAATGGAAGCAGTTGGGAGAATTAGCTATGTCTACTGGAAAGTTAGAAATGGCCGAGGAGTGTTTAAAATATGCAATGGATTTGAGTGGATTGTTGCTTCTATATTCTTCTATAGGAGATGCTGAAGGAATATCAAAACTTGCAACCCTTGCTAAAGAGCAAGGGAAGAACAATGTTGCTTTCCTTTGCTTATTTATGTTGGGTAAACTTGAAGACTGCCTTCAATTGTTAGTAGAAAGCAATCGGATTCCAGAGGCTGCCTTGATGGCTCGATCATATCTTCCAAGCAAGGTCTCAGAATTAGTGGCATTATGGAGAAAAGATCTCAGCAAGGTTAATCCAAAAGCTGCTGAATCTTTGGCTGATCCTGAGGAGTATCCTAATTTGTTTGAAGATTGGCAAGTTGCACTTGCTGTTGAATCTAAAGCTGCAGAAACAAGGGGTGTTTACCATCCTGCAGAGGAGTACGTTAACCATGCTGGTAAATCACATGTCACCCTTGTTGATGCTTTCAGAAATATGCAGATCGAAGAAGGGGATCAGCTTCTTGAGAATGGGGACTCTAATCACGAGTTGACTGAACACAATGGAGAAGATGATTATACAGAGGGGCATGAAGAACAGAATGGTGAAGAGGATTATACTGAGGAGCAAGAAGAACAAAATGGAGAGGAAAGAAGCCAAGAGGATGCAGTTGTAGTTGATGCCGATTCTACTGATGGTACAGTTCTCGTTAATGGTAATGAGGCTGATGAAGAGTTGAGTACGAATAAAGAAGGAACCCCGTCAGCGTGA 2802 0.4172 MPLRLKIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRAYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYLKGSRRVVIGYDEGTIMVKLGREEPVASMDNSGKIIWAKHNEIQTVNIRSVGADAEIADGERLPLAVKELGTCDLYPQSLRHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIVWSSDGEYAVRESTSKIKIFSKTFQEKKSIRPTFSAERIFGGTVLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIASDTSFYILKYNRDVVSSYLDSGRSVDEQGVEDAFELLHEMSERVRTGLWVGDCFIYTNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLPSQSRVYLIDKEFNVVGFTLLLSLIEYKTLVMRGDFERANEILPSIPKEHHNSVAHFLESRGMIEDALEVATDPEYRFDLAIQLGRLEVAKAIAIEVKSESKWKQLGELAMSTGKLEMAEECLKYAMDLSGLLLLYSSIGDAEGISKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSELVALWRKDLSKVNPKAAESLADPEEYPNLFEDWQVALAVESKAAETRGVYHPAEEYVNHAGKSHVTLVDAFRNMQIEEGDQLLENGDSNHELTEHNGEDDYTEGHEEQNGEEDYTEEQEEQNGEERSQEDAVVVDADSTDGTVLVNGNEADEELSTNKEGTPSA* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0158 933 PRINTS G protein beta WD-40 repeat signature 244 258 IPR020472 -
Mal7g0158 933 PRINTS G protein beta WD-40 repeat signature 202 216 IPR020472 -
Mal7g0158 933 PRINTS G protein beta WD-40 repeat signature 158 172 IPR020472 -
Mal7g0158 933 Pfam WD domain, G-beta repeat 134 171 IPR001680 GO:0005515
Mal7g0158 933 Pfam WD domain, G-beta repeat 177 215 IPR001680 GO:0005515
Mal7g0158 933 Pfam WD domain, G-beta repeat 220 256 IPR001680 GO:0005515
Mal7g0158 933 Pfam WD domain, G-beta repeat 91 127 IPR001680 GO:0005515
Mal7g0158 933 ProSiteProfiles Trp-Asp (WD) repeats profile. 11 52 IPR001680 GO:0005515
Mal7g0158 933 PANTHER COATOMER SUBUNIT BETA' 1 875 - -
Mal7g0158 933 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 181 218 - -
Mal7g0158 933 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 225 256 - -
Mal7g0158 933 Gene3D - 11 300 IPR015943 GO:0005515
Mal7g0158 933 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 95 127 - -
Mal7g0158 933 PANTHER COATOMER 1 875 - -
Mal7g0158 933 MobiDBLite consensus disorder prediction 853 933 - -
Mal7g0158 933 MobiDBLite consensus disorder prediction 853 872 - -
Mal7g0158 933 PIRSF Beta'-COP 2 904 IPR016453 -
Mal7g0158 933 ProSiteProfiles Trp-Asp (WD) repeats profile. 138 180 IPR001680 GO:0005515
Mal7g0158 933 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 138 172 - -
Mal7g0158 933 Gene3D - 590 798 - -
Mal7g0158 933 ProSiteProfiles Trp-Asp (WD) repeats profile. 181 224 IPR001680 GO:0005515
Mal7g0158 933 SUPERFAMILY WD40 repeat-like 3 297 IPR036322 GO:0005515
Mal7g0158 933 CDD WD40 17 297 - -
Mal7g0158 933 MobiDBLite consensus disorder prediction 910 933 - -
Mal7g0158 933 SMART WD40_4 174 215 IPR001680 GO:0005515
Mal7g0158 933 SMART WD40_4 218 257 IPR001680 GO:0005515
Mal7g0158 933 SMART WD40_4 46 85 IPR001680 GO:0005515
Mal7g0158 933 SMART WD40_4 4 43 IPR001680 GO:0005515
Mal7g0158 933 SMART WD40_4 88 127 IPR001680 GO:0005515
Mal7g0158 933 SMART WD40_4 131 171 IPR001680 GO:0005515
Mal7g0158 933 MobiDBLite consensus disorder prediction 873 893 - -
Mal7g0158 933 ProSiteProfiles Trp-Asp (WD) repeats profile. 225 266 IPR001680 GO:0005515
Mal7g0158 933 Pfam Coatomer WD associated region 319 763 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Mal7g0158 933 ProSiteProfiles Trp-Asp (WD) repeats profile. 95 127 IPR001680 GO:0005515
Mal7g0158 933 SUPERFAMILY NHL repeat 220 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0158 Mal-Chr7 3713526 3727261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0158 39 367 Miscellaneous Gene Families AT5G08390 22.678 9.60e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0158 K17302 - gmx:100797508 1736.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0158 7 3713526 3727261 Mal7g0158 7 3713526 3727261 ECH
Mal4g0257 4 1396665 1407461 Mal7g0158 7 3713526 3727261 PCT