Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0124 ATGTCTAAAACAGATACAACAGAAACCAATTGTTCCACCACATTATTTGAGCTACTTACAGAAATGAAGAACCAATCCAACACAGAACAATCAAATTTCCAACCAAAATCACCATCAAACTTCTCCTCAGAATGCTGGTTCGACGACGCATGCATCCTAGACATGGATTACTTTGTGAAAACACTTTCTGGAATCAAAGCAAAAGGTGTTCGAGCCGATTTAATCGGTTCCATTATTACACACTATGCATCCAAATGGCTTCCTGACATAGCTGAAAAGGGTGTAACACAATTTGAAGAATCACCTGAGAGTGTAACAGCATCATGGATGAAGAAAAGGTTCTTTGTAGAAACCTTAGTTAATGTTCTACCACCAGAGAAAGATTCAATTCCATGTAACTTTCTCCTTAGGCTATTGAGAACAGCTAACATGGTTGGTGTTGATGGAAGCTATAGACAAGAGCTTGAGAAGAGAATTTCATGGCAGTTAGATCAAGCTTGTTTGAAAGAACTTGTTATTCCTTCTTTTAGTCACACTTGTGGGACTCTTTTGGATTTTGAGCTTGTTATTAGGCTTGTTAAGAGGTTTGTTAGTTTGGATAATGAAGGTGCTAAAAGTGGTGCTGCTTTGGTTAAGGTTGCTAAGTTGGTTGATTCTTACCTTTGTGAGGCTGCTGTTGATGCTAATTTGAGGTTGGATGATTTTGTTACTCTTGCTGGTGCTCTTCCAAGTCATGCTAGAGCTACTGATGATGGTTTGTATAGAGCCATTGATACTTACCTAAAAGCACATCCAAGTGTATCAAAGCAAGAAAGGAAGGGTCTATGCAGGCTAATAGATTGCAGGAAACTAACACAAGAGGCATCACTTCATGCAGCACAAAACGAACGATTCCCGGTAAGAGCAGTGATACAAGTCCTTCTCTCAGAGCAAACAAAACTCAACAGACACAATATCAATCACAACATGGATTGGAGTGGATCCATAATGAGCATCACAAGAAGTCCAACAAATGGATTTGGATTAGAAGCAGTTCCTACGGCAAGATGTTTATCGAAGCGCGAAATGAATGCTCAACAGATTGAGATAAAGAAGCTGAGGGAAGATGTTCATAGGCTGCAGAGTCAGTGTAATGCAATGCAAGTTCAGATGGAGAGAATGGTTGAGAAGAAGAAAGGGTTTTTTAAGTGGAGTAAGAGGTTTGGTGTGCATGGTTTCGGTAAAGGAGAGAGTGGTTTCGAGAGAAGAGGAGAAGGTGGTGATGGAGATGGACAGGTAGAGTATGGAAGACAGACACCTGCTACTACTTCTGATATGAAAACTAGGTTGGTTAATGTCAAAGGTAGGACTCCTAATAGGTGGAGGAAATCTATGTCTTGA 1380 0.4022 MSKTDTTETNCSTTLFELLTEMKNQSNTEQSNFQPKSPSNFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITHYASKWLPDIAEKGVTQFEESPESVTASWMKKRFFVETLVNVLPPEKDSIPCNFLLRLLRTANMVGVDGSYRQELEKRISWQLDQACLKELVIPSFSHTCGTLLDFELVIRLVKRFVSLDNEGAKSGAALVKVAKLVDSYLCEAAVDANLRLDDFVTLAGALPSHARATDDGLYRAIDTYLKAHPSVSKQERKGLCRLIDCRKLTQEASLHAAQNERFPVRAVIQVLLSEQTKLNRHNINHNMDWSGSIMSITRSPTNGFGLEAVPTARCLSKREMNAQQIEIKKLREDVHRLQSQCNAMQVQMERMVEKKKGFFKWSKRFGVHGFGKGESGFERRGEGGDGDGQVEYGRQTPATTSDMKTRLVNVKGRTPNRWRKSMS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0124 459 Pfam NPH3 family 45 289 IPR027356 -
Mal7g0124 459 MobiDBLite consensus disorder prediction 409 439 - -
Mal7g0124 459 MobiDBLite consensus disorder prediction 409 423 - -
Mal7g0124 459 PANTHER OS12G0117600 PROTEIN 1 459 IPR043454 -
Mal7g0124 459 Coils Coil 356 390 - -
Mal7g0124 459 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 459 - -
Mal7g0124 459 ProSiteProfiles NPH3 domain profile. 44 313 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0124 Mal-Chr7 3150566 3153863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0124 43 388 EF-hand Containing Proteins AT3G44820 32.275 1.31e-53 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0124 - - cam:101500573 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0124 7 3150566 3153863 Mal7g0124 7 3150566 3153863 ECH
Mal4g0234 4 1045978 1048170 Mal7g0124 7 3150566 3153863 PCT