Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0234 ATGAAGAAACAATGTTTCAAAGAACCAGAAACAAGTCCAAACCAACAAGTATCTTTGGAATATTGTTGCTGGTTTGAAGATGCATGCATCCTTGACATGGAATGCTTCATTAAGACCCTTTCAAACATCAAACAAAAAGGTGTTCGTGCCGATTTAATCGGTTCCATCATCACTCACTATGCCTCCAAATGGCTCCCTGACCTTGAAACTTCAAATTCAAATGCAAATGTAAATGCAAATGCTAATTCACCTGAAAGTGTAACAACATCATGGATGAAGAAAAGGTTCTTTGTTGAAACCTTAGTCAGTGTTCTTCCACCCGACAAAGATTCCATTCCATGCAACTTCCTCCTTCGCCTTCTAAGAACAGCTAACATGGTTGATGTTGAGTCTACTTATCGAACCGAGCTTGAGAATCGAATTTCATGGCAGTTAGATCAAGCTTCATTGAAAGAACTCATGATACCTTCTTTTAGTCATACTTGTGGGACCCTTTTGGATGTTGAGCTTGTTATTAGGTTGGTTAAGAGGTTTGTTAGTTTGGATCATGATGGAGTTAAAACTGGTGCTGCTTTGGTTAAGGTTGCTAAGTTGGTTGATTGTTACCTTGCTGAGGCTGGTTTGGATGCTAATTTGAGTTTGTCTCAGTTTGTTGCACTTGCTGGTGCTCTTCCTAGTCATGCAAGAGCTACTGATGATGGTTTGTATAGAGCCATTGACACTTATCTTAAAGCACATCCAAGCGTGTCGAAGCAAGAAAGGAAAAGTCTGTGTAAGTTGATTGATAGCAGGAAACTCACACCAGAAGCCTCACTTCATGCAGCTCAAAACGAACGGTTGCCTGTGAGAGCTGTTATTCAAGTTCTCTTCTCCGAACAAACGAAACTCAACCGTCACGTTGATTGGAGTGCTTCTTTTAGTAGCTTGAGGAGTCCAAGTGGATACTGTGGTGTGTTGGACACACCAGCACGATGTCTTTCTAAGCGCGAAATGAACGTGCAACAAATGGAGATAAAAAAACTGAAGGAAGATATTTACAGGCTGCAAAGTCAGTGCAATGTCATGCAAGCACAGATGGAAAAAATGGCTGAGAAGAAGAAAGGTTTCTTCAAATGGAAGAAACTTGCTTTTAGTAAAAACATTGGTGGAGAAATGGAGAATGTTGAACAACATGAAGCTGAAACTGAATTTGGGTTTGGAAGACAAACACCTATGGACATGAAAACTAGTACTGTGGTCAAAAGTAGGACTCCTCAAAAGTGGAGAAAATCTCTGTCTTGA 1281 0.4036 MKKQCFKEPETSPNQQVSLEYCCWFEDACILDMECFIKTLSNIKQKGVRADLIGSIITHYASKWLPDLETSNSNANVNANANSPESVTTSWMKKRFFVETLVSVLPPDKDSIPCNFLLRLLRTANMVDVESTYRTELENRISWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFVSLDHDGVKTGAALVKVAKLVDCYLAEAGLDANLSLSQFVALAGALPSHARATDDGLYRAIDTYLKAHPSVSKQERKSLCKLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHVDWSASFSSLRSPSGYCGVLDTPARCLSKREMNVQQMEIKKLKEDIYRLQSQCNVMQAQMEKMAEKKKGFFKWKKLAFSKNIGGEMENVEQHEAETEFGFGRQTPMDMKTSTVVKSRTPQKWRKSLS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0234 426 Coils Coil 331 358 - -
Mal4g0234 426 ProSiteProfiles NPH3 domain profile. 22 295 IPR027356 -
Mal4g0234 426 Pfam NPH3 family 23 271 IPR027356 -
Mal4g0234 426 PANTHER OS12G0117600 PROTEIN 20 426 IPR043454 -
Mal4g0234 426 MobiDBLite consensus disorder prediction 406 426 - -
Mal4g0234 426 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 20 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0234 Mal-Chr4 1045978 1048170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0234 24 361 EF-hand Containing Proteins AT3G44820 32.353 2.32e-52 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0234 - - gmx:100777820 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0234 4 1045978 1048170 Mal4g0234 4 1045978 1048170 ECH
Mal4g0234 4 1045978 1048170 Mal7g0124 7 3150566 3153863 PCT