Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3943 ATGGGAAAGGGCTATGAAGAAGCTGTTGAAGAACTCCAAAAATTGTTGAGGGAGAAGACTGAATTGAAAGCCACAGCAGCTGAAAAAGTTGAGCAAATCACAGCTCAACTAGGTTCAACATCAACTGATAGCATTCCAACATCTGAAGCCTCAGAGAGGATCAAATCTGGTTTCCTTCACTTCAAGAAAGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAAGCCCCTCCGTTTATGGTATTTGCATGCTCAGACTCAAGAGTCTGCCCATCTCATGTGCTAGATTTCCAGCCAGGAGAAGCTTTTGTGGTCAGAAATGTTGCTAACATGGTTCCACCATATGACCAGGCAAAATATGCTGGAACTGGATCTGCCATTGAGTATGCTGTTCTGCATCTCAAGGTGTCCAACATTGTGGTCATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTTTGTCTTTTCCATTTGATGGACCCTACTCTACTGATTTCATTGAGGAGTGGGTCAAAATTGGTTTACCTGCAAAGGCAAAGGTGAAGGCAAAGCATGGAGATGCACCTTTTGGAGAGCTATGCACACACTGTGAGAAGGAAGCTGTGAATGTTTCACTTGGAAACCTTCTTACCTACCCATTTGTGAGAGAAGGATTGGTGAACAAAACATTGGCACTAAAAGGAGGATATTATGACTTTGTGAAAGGATCTTTTGAGCTTTGGGGACTTGAATTTGGCCTTTCTTCAACTTTCTCCGTATGA 777 0.4311 MGKGYEEAVEELQKLLREKTELKATAAEKVEQITAQLGSTSTDSIPTSEASERIKSGFLHFKKEKYDKNPALYGELAKGQAPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPYDQAKYAGTGSAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGPYSTDFIEEWVKIGLPAKAKVKAKHGDAPFGELCTHCEKEAVNVSLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3943 258 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 258 - -
Mal6g3943 258 SMART Pro_CA_2 77 247 IPR001765 GO:0004089|GO:0008270
Mal6g3943 258 CDD beta_CA_cladeB 57 246 IPR045066 GO:0004089|GO:0008270
Mal6g3943 258 Pfam Carbonic anhydrase 85 242 IPR001765 GO:0004089|GO:0008270
Mal6g3943 258 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 133 153 IPR015892 GO:0004089|GO:0008270|GO:0015976
Mal6g3943 258 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 89 96 IPR015892 GO:0004089|GO:0008270|GO:0015976
Mal6g3943 258 PANTHER CARBONIC ANHYDRASE 1 258 IPR001765 GO:0004089|GO:0008270
Mal6g3943 258 Gene3D Carbonic anhydrase 38 258 IPR036874 GO:0004089|GO:0008270
Mal6g3943 258 SUPERFAMILY beta-carbonic anhydrase, cab 51 253 IPR036874 GO:0004089|GO:0008270
Mal6g3943 258 Coils Coil 5 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3943 Mal-Chr6 113923762 113926716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3943 K01673 - gmx:100781868 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3943 6 113923762 113926716 Mal2g2376 2 29600731 29602311 ECH
Mal6g3943 6 113923762 113926716 Mal6g3943 6 113923762 113926716 ECH
Mal6g0134 6 1906172 1913223 Mal6g3943 6 113923762 113926716 ECH
Mal5g2854 5 84788004 84794209 Mal6g3943 6 113923762 113926716 ECH