Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2854 ATGGCAGGAGAGTCATACGAGGAGGCCATTGCAGAGTTGACGAAGCTTCTAAGCGAGAAGGCTGACCTTGGTGGTGTCGCCGCGGCAAAGATCAAGCAGTTGACGACAGAGCTGGTGGCTGCTGGGTCGGAGTCTTTAAAGTCGGATGAGAGAATTCGAACTGGGTTTGACCGTTTCAAGAATAAAAAATTCCAGAAAAATCAAGAATTGTATGGTGAACTTGCCAAAGGACAGAGCCCAAAGTTTCTGGTATTTGCTTGCTCAGACTCAAGAGTTTGCCCGTCCCATGTTCTAGATTTTCAACCTGGTGAAGCCTTTGTGGTCCGTAACATTGCCAACATGGTTCCACCATATGACAAGAGCAAGTATTCAGGAACGGGGGCTGCCATTGAATATGCGGTCATACATTTAAAGGTGGAGAATATTGTAGTTATTGGACACAGCTGCTGTGGAGGTATAAAGGGCCTCATGTCCATCCCAGATGATGGGACCACTGCAAGTGACTTTATAGAGCAGTGGGTCCAAATTTGTAATCCAGCAAAGTCCAAAGTTAAAGAAGAGGCAAGCAAATTAGATTTCTCTCAGCAGTGTACCAACTTGGAGAAGGCAACTGTTAATGTATCCCTTGGGAATTTATTGACTTATCCATTTGTGAGAGATGCTGTTGTGAAGAAAACGATTGCTTTGAAAGGTGCACATTACGATTTTCTTAAGGGAGCATTTGAGCTGTGGGATATAGACTTCAAAATTTCACCCTCAAAGTCCTTTTAA 771 0.441 MAGESYEEAIAELTKLLSEKADLGGVAAAKIKQLTTELVAAGSESLKSDERIRTGFDRFKNKKFQKNQELYGELAKGQSPKFLVFACSDSRVCPSHVLDFQPGEAFVVRNIANMVPPYDKSKYSGTGAAIEYAVIHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICNPAKSKVKEEASKLDFSQQCTNLEKATVNVSLGNLLTYPFVRDAVVKKTIALKGAHYDFLKGAFELWDIDFKISPSKSF* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2854 256 Pfam Carbonic anhydrase 83 240 IPR001765 GO:0004089|GO:0008270
Mal5g2854 256 CDD beta_CA_cladeB 55 244 IPR045066 GO:0004089|GO:0008270
Mal5g2854 256 PANTHER CARBONIC ANHYDRASE 1 256 IPR001765 GO:0004089|GO:0008270
Mal5g2854 256 SMART Pro_CA_2 75 245 IPR001765 GO:0004089|GO:0008270
Mal5g2854 256 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 131 151 IPR015892 GO:0004089|GO:0008270|GO:0015976
Mal5g2854 256 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 87 94 IPR015892 GO:0004089|GO:0008270|GO:0015976
Mal5g2854 256 SUPERFAMILY beta-carbonic anhydrase, cab 50 250 IPR036874 GO:0004089|GO:0008270
Mal5g2854 256 Gene3D Carbonic anhydrase 41 256 IPR036874 GO:0004089|GO:0008270
Mal5g2854 256 PANTHER CARBONIC ANHYDRASE 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2854 Mal-Chr5 84788004 84794209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2854 K01673 - gmx:100803945 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2854 5 84788004 84794209 Mal5g2854 5 84788004 84794209 ECH
Mal5g2854 5 84788004 84794209 Mal2g2377 2 29620906 29623667 ECH
Mal5g2854 5 84788004 84794209 Mal6g3943 6 113923762 113926716 ECH
Mal6g0134 6 1906172 1913223 Mal5g2854 5 84788004 84794209 PCT