Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3163 ATGAAGGAATTGTTTCAAGAGCCGGTTAGGAGACCCAAATTTCTGCAATTTTGGCCGCTTTATGGCGCCTTTATGGTGGGATGGGGTTGTCCTCCAAGCAAATTTCCATGGAGTTATGATTCCAAAGAGACTTGCTATCTTCTAGAAGGAAAAGTTAAGGTAACACCAAGTGGAGCAAACGAGTCTGTTGAATTTGGTGCTGGTGACTTGGTTGTGTTTCCTAAAGGAATGAGTTGTACTTGGGATGTGTCTGTTGCTGTGAACAAACACTATCTCTTTGAATAA 285 0.4211 MKELFQEPVRRPKFLQFWPLYGAFMVGWGCPPSKFPWSYDSKETCYLLEGKVKVTPSGANESVEFGAGDLVVFPKGMSCTWDVSVAVNKHYLFE* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3163 94 Pfam EutQ-like cupin domain 27 91 IPR008579 -
Mal6g3163 94 PANTHER OS04G0445200 PROTEIN 24 94 - -
Mal6g3163 94 SUPERFAMILY RmlC-like cupins 8 92 IPR011051 -
Mal6g3163 94 Gene3D Jelly Rolls 20 93 IPR014710 -
Mal6g3163 94 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 24 94 - -
Mal6g3163 94 CDD cupin_TM1112-like 28 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3163 Mal-Chr6 93068126 93070523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3163 K06995 - egr:104450754 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3163 6 93068126 93070523 Mal1g1163 1 14598282 14598865 PCT