Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1163 ATGGCATCATCATGTGTAGGAACTTTATCATCACCAAACCCCTCTCTATTTTTCTCACAAACCAAACATTTGACTGCTACCAAGGTAAGTGTTACTTTGCCTTTAACAAGGAGAAGGGTTGTAAGAGCAGCTGTCACAGAAAAACTTGGCATCAAGATTGAGAGGAACCCTCCTGAGTCCAAGCTCACTCAACTTGGTGTCAGACAGTGGCCCAAGTGGGGTTGTCCTCCAAGCAATTTCCCATGGACATATGATGCAACAGAGACATGTTATCTTTTGGAAGGAAAAGTGAAGGTCACTCCTAGTGGGGCTAATGAGGCAGTTGAAATTGCTGCTGGTGACTTGGTTGTTTTTCCTAAAGGGATGAGTTGCACTTGGGATGTTTCTGTTGGTGTGGATAAGCACTATAAATTTGAGTGA 420 0.4357 MASSCVGTLSSPNPSLFFSQTKHLTATKVSVTLPLTRRRVVRAAVTEKLGIKIERNPPESKLTQLGVRQWPKWGCPPSNFPWTYDATETCYLLEGKVKVTPSGANEAVEIAAGDLVVFPKGMSCTWDVSVGVDKHYKFE* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1163 139 Gene3D Jelly Rolls 40 138 IPR014710 -
Mal1g1163 139 PANTHER OS04G0445200 PROTEIN 34 139 - -
Mal1g1163 139 SUPERFAMILY RmlC-like cupins 58 136 IPR011051 -
Mal1g1163 139 Pfam EutQ-like cupin domain 63 136 IPR008579 -
Mal1g1163 139 PANTHER OS04G0445200 PROTEIN 34 139 - -
Mal1g1163 139 CDD cupin_TM1112-like 70 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1163 Mal-Chr1 14598282 14598865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1163 K06995 - gmx:100499968 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1163 1 14598282 14598865 Mal1g1163 1 14598282 14598865 ECH
Mal6g3163 6 93068126 93070523 Mal1g1163 1 14598282 14598865 PCT