Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3010 ATGGCTCACTCTACTACTCCATCAGTTGAATCCAATGATCTCACAAAAGATCATAAGGAAACAAGTTCACTGGTTGTTTCCTTTGGGGAAATGTTGATAGACTTTGTGCCAACGGTGGGAGGAGTGTCGCTCGCCGAGGCACCAGCTTTCAAGAAATCTGCTGGTGGAGCTCCTGCCAATGTTGCTGTTGGTATTTCTAGATTGGGAGGTTCATCTGCTTTTATAGGCAAGGTTGGAGAGGATGAATTTGGTTACATGTTGGCTGATATTCTAAAGCAGAACAATGTTGATACTTCTGGAATGCGGTTCGACTCTAATGCAAGAACTGCATTAGCTTTTGTCACACTTAGATCTGATGGAGAACGCGAGTTCTTGTTTTTCCGGAATCCAAGTGCTGATATGCTTCTTCAAGAGTCGGAACTTGATAGAAATCTCTTAAAGAAGGCAAGAATTTTCCATTATGGCTCCATTAGTTTAATTGATGATCCATGCAAATCAGCACACATAGCTGCTATGAGAATTGCCAAAAGCTCTGGTTGCATTCTCTCGTATGATCCAAATTTGAGATTGGCGCTATGGCCGTCTGCCGAGGCTGCTCGGAAAGGCATAATGAGTATATGGGATCAAGCTGATATCATTAAGATAAGTGAGGATGAGATTATATTTTTGACTGGAGGTGATGATCCTTATGATGATGAAGTTGTTTTGAAGAAACTTTTTCATCCTAAACTCAAACTCTTAATTGTTACTGAAGGGTCTAAGGGTTGTCGATATTACACAAAGGAATTTAGAGGCAGGGTTGGAGGTGTTAAAGTTAAACCTGTTGACACAACTGGTGCTGGTGATGCATTTGTTAGTGGGTTTCTATACAGTATAGCTTCTGACCCAAATATTTTTCAGGATGAGAAAAATCTCAGAAAAGCTTTGTATTTTGCTAATGTATGTGGAGCCATCACAGTAACAGAAAGAGGTGCAATTCCTTCACTACCTACAAAGGAGGCTGTTTTGCAATTCTTACTAGAAGCAGCTGTAATATAA 1038 0.4046 MAHSTTPSVESNDLTKDHKETSSLVVSFGEMLIDFVPTVGGVSLAEAPAFKKSAGGAPANVAVGISRLGGSSAFIGKVGEDEFGYMLADILKQNNVDTSGMRFDSNARTALAFVTLRSDGEREFLFFRNPSADMLLQESELDRNLLKKARIFHYGSISLIDDPCKSAHIAAMRIAKSSGCILSYDPNLRLALWPSAEAARKGIMSIWDQADIIKISEDEIIFLTGGDDPYDDEVVLKKLFHPKLKLLIVTEGSKGCRYYTKEFRGRVGGVKVKPVDTTGAGDAFVSGFLYSIASDPNIFQDEKNLRKALYFANVCGAITVTERGAIPSLPTKEAVLQFLLEAAVI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3010 345 CDD bac_FRK 24 326 - -
Mal6g3010 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Mal6g3010 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Mal6g3010 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Mal6g3010 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Mal6g3010 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Mal6g3010 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Mal6g3010 345 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Mal6g3010 345 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Mal6g3010 345 Gene3D - 21 344 IPR029056 -
Mal6g3010 345 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3010 Mal-Chr6 83912282 83918205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3010 K00847 - gmx:100792618 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1962 1 25799601 25802774 Mal6g3010 6 83912282 83918205 ECH
Mal6g3010 6 83912282 83918205 Mal6g3010 6 83912282 83918205 ECH
Mal6g3010 6 83912282 83918205 Mal1g1962 1 25799601 25802774 PCT