Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1962 ATGGCCCAGTTTACCCCCTCAGGTAAATCTGATGATCTCATAACAGAAGGCTGCAACGGAACAAGTGGACTGGTTGTTTGTTTTGGTGAATTGTTAATAGATTTCGTGCCAACAGTGGGTGGAGTGTCTCTAGCCGAAGCGCCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCGAACGTGGCAGTTGGCATCTCTAGGTTGGGGGGTTCATCTGCATTTCTAGGCAAGGTTGGAGCAGATGAATTTGGGTATATGTTGGCTGATATTTTAAAGCAAAATAATGTTGATACATCTGGCATGCGGTTTGATTCTAATGCCAGAACCGCATTGGCTTTTGTTACACTTAGAGCTGATGGCGAGCGTGAGTTCTTGTTTTTCCGAAATCCTAGTGCTGATATGCTTCTGGATAAGTCAGAGCTTGATCATAACCTCATTGAGAAGGCTAAAATATTCCATTATGGTTCCATCAGTTTGATTGATGATCCATGTAAGTCAGCTCATCTTGCTGCCTTGAGAATTGCTAAAGACTCTGATTGCATTCTCTCGTATGATCCGAATTTGAGATTGGCACTATGGCCATCAGCTGAGGCTGCTCGGAATGGTATAATGAGCATATGGGATCTAGCCGATGTCATAAAGATCAGTGAAGATGAGATTACTTTTTTGACTGGTGGTGATGATCCTTATGATGATGATGTTGTATTAAACAAGCTTTTTCACCCTAATCTCAAGCTTCTAATTGTTACTGAAGGGTCAGAGGGTTGTAGATATTACACCAAGGATTTCAAGGGAAAAGTTGGAGGTGTTAAAGTTAAACCTGTTGACACAACTGGTGCTGGTGATGCATTTGTTAGTGGGATTCTCTACAGCATAGCTTCTGACCCAAGTATTTTCGAGGACGAGGAGCGTCTCCAAAAAGCGCTATATTTTGCGAATGTGTGTGGTGCGATTACGGTGACAGAGAGAGGGGCAATTCCTGCACTACCTACAAAAGACGCTGTCCTGCAATTTGATGCAATATAG 1026 0.4327 MAQFTPSGKSDDLITEGCNGTSGLVVCFGELLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFLGKVGADEFGYMLADILKQNNVDTSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLDKSELDHNLIEKAKIFHYGSISLIDDPCKSAHLAALRIAKDSDCILSYDPNLRLALWPSAEAARNGIMSIWDLADVIKISEDEITFLTGGDDPYDDDVVLNKLFHPNLKLLIVTEGSEGCRYYTKDFKGKVGGVKVKPVDTTGAGDAFVSGILYSIASDPSIFEDEERLQKALYFANVCGAITVTERGAIPALPTKDAVLQFDAI* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1962 341 CDD bac_FRK 24 326 - -
Mal1g1962 341 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Mal1g1962 341 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Mal1g1962 341 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Mal1g1962 341 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Mal1g1962 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Mal1g1962 341 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Mal1g1962 341 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Mal1g1962 341 PANTHER HEXOKINASE FAMILY MEMBER 13 339 - -
Mal1g1962 341 Gene3D - 22 340 IPR029056 -
Mal1g1962 341 PANTHER CARBOHYDRATE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 13 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1962 Mal-Chr1 25799601 25802774 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1962 K00847 - gmx:100818404 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1962 1 25799601 25802774 Mal6g3010 6 83912282 83918205 ECH
Mal1g1962 1 25799601 25802774 Mal1g1962 1 25799601 25802774 ECH
Mal6g3010 6 83912282 83918205 Mal1g1962 1 25799601 25802774 PCT