Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2110 ATGAAAAAATTGTATGGAGGAGTTCTTATTGCCTCATCGTTTACGTTGTTTATGCTTATGATCCTGCGATATGGGGTCATGAAAAATCCTATTGGTGAAGGTTATTTGACTATACCTGTCTTAATTAATGGTACTAATCCTCTAGAATGGATAAATCCTGTGATTCCGCCTGCTATTCAAAATCCAGTTGCTACTCCTCAAGTTATTTCTGCGGACATTTTAGTATCTAGCCTCTTTGCCAGGAACAACTTTTCCAAACAAGAGCAGCAAACTCTGCAGACATGGAACCACTTGAAACACTTAATTGATCATGTTCAGGGTTTACCTAGTGCAACAGAAGCTATAAAGGAAGCTGCCAGTGCATGGAATAGTCTTGTTTCCTCAGTTGAAGAGCAAAAGCAAGGTCATTCAAATGATAGTTCAAGAGCAAAAGAGAAACAGTGTCCCCATTTTCTTAATAAGATGAATTCTACTGAACTTGGTAATAGTAGTTACAGACTGCAAGTACCTTGTGGTCTGACACAGGGTTCTTCGATTACTGTAATTGGCATTCCAAATGGTATTCTTGGTAATTTTCGTATAGACTTGACTGGAGAACCAATTCCTGGGGAGCCTGATCCCCCAGTTATCTTGCACTACAATGTTAGGCTGCATGGTGATAAAATCACGGAAGATCCAGTAATTGTCCAAAACACCTGGACAGTAGCTCATGATTGGGGTGAAGAGGAACGATGTCCGTCCCCTGAATCTAAAGAGATTAAGAAAGTCGATGAGTTGGAGCAGTGCAATAAGATTGTTGGGAAGAGCATTAGCCAACTTTACACAGGCGGCATGCATTCTCACACTTCAAGACAAATTTCAGCAACTGAAGAGCAATTAATTAAGAGAAAAAACTTCCCTTTTAAGCAAGGTTACCCATTTGTCGCAACTATTAGAGTGGGATCAGAGGGAATCCAGATGACAGTTGATGGAAAGCACATAACTTCATTTGCTTTTCGTGAAACTTTGGAGCCATGGCTTGTCAGTGAGATTAAAATTTCTGGGGACCTAAAACTAGAATCTATTATTGCAAGTGGTCTGCCTACATCAGAGGATTCAGAGCATATTGTTGATCTGGAATTATTGAAATCAAGTCCGGTATCTTCACAGGCCCCATTGGATCTCTTCATTGGTGTTTTCTCTACAGCTAACAACTTTAAGCGACGGATGGCTGTTAGGAGAACCTGGATGCAGTACAATGCAGTTAGATCGAATACAACAGCTGTGCGCTTCTTTGTTGGCTTGCATAAAAGCCAAATAGTTAATGAAGAACTGTGGAAAGAAGCACAAACGTATGGAGACATACAGTTGATGCCGTTTGTTGACTACTACAGCCTCATCACCTGGAAATCTTTAGCAATATGCATTTTCGGGACACAGGTTGTTTCAGCAAAGTTTGTCATGAAGACAGATGATGATGCATTTGTTCGTGTAGATGTAGTACTAGGCTCTTTGCGGAGAATCAATGTATCTCATGGGTTACTATATGGACTCATCAATTCAGATTCCCAACCTCATCGAAATCCTGATAGCAAATGGTTCATCAGCCAAGAGGAATGGAGCGAAGGAACTTATCCTCCATGGGCACATGGTCCTGGTTATGTAGTCTCACATGACATAGCAAGGACAGTGTACAAGAAATACAAAGAGAATCATTTGAAGATGTTTAAACTAGAAGACGTTGCGATGGGAATCTGGATTGCAGACATGAAGAAGGAAGGTCTAGAAGTTCGATACGAGAATGAGCCCAGAGTTTATAATGAAGGTTGCAAGGACGGTTATGTGGTTGCCCATTATCAAGGTCCTAGGGAGATGCTATGTTTGTGGCACAAACTTCAGGAGTTAAAACGTTCAACATGCTGTGGTGATAGGAGGTGA 1917 0.41 MKKLYGGVLIASSFTLFMLMILRYGVMKNPIGEGYLTIPVLINGTNPLEWINPVIPPAIQNPVATPQVISADILVSSLFARNNFSKQEQQTLQTWNHLKHLIDHVQGLPSATEAIKEAASAWNSLVSSVEEQKQGHSNDSSRAKEKQCPHFLNKMNSTELGNSSYRLQVPCGLTQGSSITVIGIPNGILGNFRIDLTGEPIPGEPDPPVILHYNVRLHGDKITEDPVIVQNTWTVAHDWGEEERCPSPESKEIKKVDELEQCNKIVGKSISQLYTGGMHSHTSRQISATEEQLIKRKNFPFKQGYPFVATIRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIKISGDLKLESIIASGLPTSEDSEHIVDLELLKSSPVSSQAPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNTTAVRFFVGLHKSQIVNEELWKEAQTYGDIQLMPFVDYYSLITWKSLAICIFGTQVVSAKFVMKTDDDAFVRVDVVLGSLRRINVSHGLLYGLINSDSQPHRNPDSKWFISQEEWSEGTYPPWAHGPGYVVSHDIARTVYKKYKENHLKMFKLEDVAMGIWIADMKKEGLEVRYENEPRVYNEGCKDGYVVAHYQGPREMLCLWHKLQELKRSTCCGDRR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2110 638 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 165 358 IPR001079 GO:0030246
Mal6g2110 638 MobiDBLite consensus disorder prediction 127 147 - -
Mal6g2110 638 Pfam Galactoside-binding lectin 165 355 IPR001079 GO:0030246
Mal6g2110 638 Gene3D - 378 602 - -
Mal6g2110 638 Gene3D - 157 357 - -
Mal6g2110 638 Pfam Galactosyltransferase 400 584 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mal6g2110 638 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 358 IPR013320 -
Mal6g2110 638 CDD GLECT 165 355 IPR001079 GO:0030246
Mal6g2110 638 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 65 627 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mal6g2110 638 SMART Gal_bind_lectin_2 169 357 IPR001079 GO:0030246
Mal6g2110 638 PANTHER - 65 627 - -
Mal6g2110 638 SMART galectin_3 165 358 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2110 Mal-Chr6 48940534 48944028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2110 1 634 Glycosyltransferase AT1G26810 62.773 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2110 K14413 - gmx:100780913 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2110 6 48940534 48944028 Mal6g2110 6 48940534 48944028 ECH
Mal5g4984 5 123368724 123373819 Mal6g2110 6 48940534 48944028 PCT