Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4984 ATGAAACAGTTATATTTATTCCATGGTTTATTGAAAATGAAGAAGTGGTATGGAGGCCTTTTTATCATGGCTTTGGGTATGACGTTGTTTCTACTGTACAGTCTTAAAGGAATTCAGCCACAAAAGCAGTCAACAAAACAGTCAGCATACAGTTTTTTCAATAACCATTCACCACCAAATGATTCTATTAAAGAAAAGAGCAATGTTGCAGTAGTAACCACTTTCGAAGCAGATTTGAAAATGGTACCGAAACCAACAAAACGGCCACATTTGATACATGTCACAGGGCTTGATGATCTGTATGACACGAATAATTTATCTGAACGAGAGATGAATGTTGTACTTGTTTGGACACATTTACGCTTGTTGCTGTCGAGGTCAGATGCTTTGCCCGAAATAGCTCAAGGAGTTAAAGAAGCATCTGTAGCTTGGAAAGAGTTGTTATCGACTGTTGAAAATGACAAAGCCTCGAAGATTAGTAAGATAGACGGCCCAGAAAATCAAAACTGTCCATTCTCTGTGACCAAACTTGGCAAGACAATGACAGATAGTGAAACCACACTGGATCTCCCTTGTGGTTTGGTCGTAGATTCTTCTATTACAATGATTGGCATCCCTAATGGGAAAAACAGTAGCTTTCAGATTGACCTAGCTGGACAAGAGCTAGAAGAGGAGCCAAATCCTCCAATTATCTTGCATTATAATGCGAGTCTTCCTGGAGAAAACATGACAGAGATGCCGTATATAGTTCAAAATACGTGGAGTAGTGATTTTGGGTGGGGGAAAGAGGAAAGATGCCCTGCTCATGGTTCCGCTAACATCCGCAAAGTTGATGAGCTTGTTCTCTGCAATGTACAAGCTGTCAGAAATAACAACGAAGAGAATGTAAATGTTGGTCAACCTACTAGCGATATACCTTCTAATATTTCCTCAGAAAGTGCACATAGAACTGCTAATTTCCCTTTTTCTGAGGGTAATCCTTTCACTGCCACATTGTGGGTTGGTTCAGAAGGATTTCATATGACTGTGAATGGAAGGCATGAAACATCTTTTGCATATAGGGAGAAGCTTGAACCATGGTTAGTCAGCACGATTAAAGTAGCAGGCAGTTTAAGTCTTTTATCAGTTCTGGCTAAAGGTTTACCCGTTACGGAAGATAATGATATAGTTGTTGATGTTGAGAACCTGAAGGCTCCTTCTATCCCTAGAAAAAGGCTTGTTTTGTTGATCGGAGTATTCTCTACCGGAAATAACTTTGAGCGTCGAATGGCTCTGAGGAGGTCTTGGATGCAATATGAGGCTATACGTTCTGGTGAAGTTGCTGTCAGATTTTTCATTGGACTTCATAAGAATAATAGAGTTAATCTTGAATTATGGAAGGAAGCTCAAGCATATGGAGATATCCAGTTAATGCCTTTTGTTGATTATTATAGTTTGATTTCTTTGAAGACAATTGCAATTTGCATTATGGGGACAAAAATCATCCCTTCTAAATACATCATGAAAACAGATGATGATGCTTTCATAAGGATTGATGAAGTTCTTTCCAACCTCAAAGGGAAGCCATCTGAAGGCCTCTTGTACGGTCTAATATCTTCTAAATCATCTCCTGATAGGGATAAGGACAGCAAGTGGTACATCAGTGATAAGGAATGGCCACATAATGCATACCCACCATGGGCACATGGTCCTGGATATGTCATCTCTCGCGACATAGCAAAATTCGTTGTATTTGGCCACCAGGAAAGAAAACTCAAGTTCTTTAAATTAGAAGATGTTGCCATGGGCATATGGATTGAACAATTTAAGAATGGTGGAAAAGAAGTTCACTATGAGAATGATGAAAGGTTTTACAATGCTGGATGTGATTCAAATTATGTACTTGCACATTATCAAAGCCCAAGGATGGTGCTATGCCTGTGGGAGAAACTGCAGAAAGAACACAAACCAGAATGCTGCGAGTAG 1965 0.3954 MKQLYLFHGLLKMKKWYGGLFIMALGMTLFLLYSLKGIQPQKQSTKQSAYSFFNNHSPPNDSIKEKSNVAVVTTFEADLKMVPKPTKRPHLIHVTGLDDLYDTNNLSEREMNVVLVWTHLRLLLSRSDALPEIAQGVKEASVAWKELLSTVENDKASKISKIDGPENQNCPFSVTKLGKTMTDSETTLDLPCGLVVDSSITMIGIPNGKNSSFQIDLAGQELEEEPNPPIILHYNASLPGENMTEMPYIVQNTWSSDFGWGKEERCPAHGSANIRKVDELVLCNVQAVRNNNEENVNVGQPTSDIPSNISSESAHRTANFPFSEGNPFTATLWVGSEGFHMTVNGRHETSFAYREKLEPWLVSTIKVAGSLSLLSVLAKGLPVTEDNDIVVDVENLKAPSIPRKRLVLLIGVFSTGNNFERRMALRRSWMQYEAIRSGEVAVRFFIGLHKNNRVNLELWKEAQAYGDIQLMPFVDYYSLISLKTIAICIMGTKIIPSKYIMKTDDDAFIRIDEVLSNLKGKPSEGLLYGLISSKSSPDRDKDSKWYISDKEWPHNAYPPWAHGPGYVISRDIAKFVVFGHQERKLKFFKLEDVAMGIWIEQFKNGGKEVHYENDERFYNAGCDSNYVLAHYQSPRMVLCLWEKLQKEHKPECCE* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4984 654 CDD GLECT 187 376 IPR001079 GO:0030246
Mal5g4984 654 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 102 646 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mal5g4984 654 SMART Gal_bind_lectin_2 190 378 IPR001079 GO:0030246
Mal5g4984 654 Gene3D - 181 378 - -
Mal5g4984 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 187 380 IPR013320 -
Mal5g4984 654 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 102 646 - -
Mal5g4984 654 SMART galectin_3 182 379 IPR001079 GO:0030246
Mal5g4984 654 Gene3D - 402 628 - -
Mal5g4984 654 Pfam Galactoside-binding lectin 187 377 IPR001079 GO:0030246
Mal5g4984 654 Pfam Galactosyltransferase 420 602 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mal5g4984 654 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 186 379 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4984 Mal-Chr5 123368724 123373819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4984 11 654 Glycosyltransferase AT3G06440 50.541 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4984 K20843 - gmx:100816729 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4984 5 123368724 123373819 Mal5g4984 5 123368724 123373819 ECH
Mal5g4984 5 123368724 123373819 Mal6g2110 6 48940534 48944028 PCT